Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02122 ATGGTTGGAGGGTTAGTTGGAGACAACATAGGATTGAATGAAGAGGTTATCAAGAAGACATGTAGTTTGTCTTTCAAAGCTCACAAGTCAGCAAAGGAACTTTATATTTCTGAAACTTTTAAGACATCCTCGGAATCAGCAGCATATCTTGTCATAAGCTTTCCTGGATCATGGGTTCAAACTGACTGGTTTGTTACAAAACCTTTTGGAGAAACTAAAATAGATCTTGCTCACTTCCCTTTACTTAAAAGTGTTGGTAATGATGAAACTGCTTTGGTAAACCAAACTTTCTTAAACAGATTCGACCGATTATTCAAATTCTCCTCGATTATATCCGAGGTGAAGAAAGGTATGGCAGAAGGGAAGCAAGTAGTGTTTACAGGTCATTCTTCAGGGGCTGTTTTGGCCATTCTTGTAACATTTTGGGCCTTGGAAGAGAATCTTAACCAAACTCAGCTTAAGCCACCCATGTGTGTCACTTTTGGTTCTCCTTTGGTTGGGAATCATATATTCTCTCATGCTTCAAACAGACAAAACTGGTCTCGTCGCTTCATACACTTTGTCATGAGATATGACATAGTGCCGAGGATTTTTCTTGCTCCTTTTTCTAGTATTGAAAAACTTTTTAGTCCTGTTCTTCAACTTTTGACTCCTGACAACGACAACTTCGAATCTCAGGATTCAATAAGAGATAGTGTGAGTTGTGAATTTTACTCCACAGTGATGAGGAATGCAGCAACTGTTACAAGGCACGTTGCTTGTAATCTAATGGGAAGCACGAATTTGTTGCTGGAGACTATGACAAACTTTGTTGAGTTAAGCCCTTATAGACCCTTTGGAACTTACATTTTCTGCAATGGTAATGGCCAGTTGATTGTGGTAAATAACTCAGAGGCAGTTTTACAACTCATGTTTCACATTGCTCAGTTAAAAGATTCAACACAACTTTCTGAAGTTGCCAACAAAAGCATACTGCAACATCTAGTCTATGAAGCTGAATTAGAGGAAAGTTTGGCAATGCAAAATGTGGTGTACTTAAACAAACTTGATGACCTTCCTTTGTCTTCTGGTGATGCTCCTAATACCGACGTTGCAGCCGCCTTGGATAGCCTTGGACTGAGCGTAAGAGCGCGGCTGTGTCTTAGAGCAGCTGGTGAGTTAGAAAAGAAAAAAGAAAGAAATGAGGAGAAAATAAAAAAGGAGATTCAAGAGAAGGCTGTGCCAAGCATGAGGGATTTGGAAGAGTACAGAGCAACATGTGAGATAAACAAAGGAAAAGGTTATTATGATGCCTTCAAGGTGCAAAAGGAGGGAAAGGATTTCCAAGCAAACGTGAAGAGGCTCGTGCTCGCAGGAGTATGGGATGAGATCATTGAAATGCTCAAGAGGTATGAACTGCCAGACGTGTTTGAAGGAAAAAAAGAATGGATTGAACTCGGAACCTGGTTCCGTCGTCTTGTTGAGCCTCTAGATATTGCCAATTATTACGGTCATTTGAAGAATGAGGACACAGGTCCTTACATGAACAAGGCTAGGCCAAAGAGGTATAGGTATACTCAGAGATGGTTGGAACATGCTAACAGGTTGTCAAAAGAAGATATCACAGAATCCACCTTTTGGGCTGAGGTGGAGGAGCTTTGCAGCTGGATTAGTAAGAATAAACCATTTGAAGATGTTAAGGAAAGGGTTCTCAATCTTGAGCATGATATTAAAAATTGGACTGATAAAGGGATACTAACCAAGGATGTGTTCTCAAAGGATCCTACCTTCATAAAGTTATGGGAAACTCTACCTCATGAACACAAATCCACATCCTGCATCTCTACTCTCTTTACTGTTAAACGATAA 1848 0.401 MVGGLVGDNIGLNEEVIKKTCSLSFKAHKSAKELYISETFKTSSESAAYLVISFPGSWVQTDWFVTKPFGETKIDLAHFPLLKSVGNDETALVNQTFLNRFDRLFKFSSIISEVKKGMAEGKQVVFTGHSSGAVLAILVTFWALEENLNQTQLKPPMCVTFGSPLVGNHIFSHASNRQNWSRRFIHFVMRYDIVPRIFLAPFSSIEKLFSPVLQLLTPDNDNFESQDSIRDSVSCEFYSTVMRNAATVTRHVACNLMGSTNLLLETMTNFVELSPYRPFGTYIFCNGNGQLIVVNNSEAVLQLMFHIAQLKDSTQLSEVANKSILQHLVYEAELEESLAMQNVVYLNKLDDLPLSSGDAPNTDVAAALDSLGLSVRARLCLRAAGELEKKKERNEEKIKKEIQEKAVPSMRDLEEYRATCEINKGKGYYDAFKVQKEGKDFQANVKRLVLAGVWDEIIEMLKRYELPDVFEGKKEWIELGTWFRRLVEPLDIANYYGHLKNEDTGPYMNKARPKRYRYTQRWLEHANRLSKEDITESTFWAEVEELCSWISKNKPFEDVKERVLNLEHDIKNWTDKGILTKDVFSKDPTFIKLWETLPHEHKSTSCISTLFTVKR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02122 615 Coils Coil 556 576 - -
Vifa2g02122 615 SUPERFAMILY alpha/beta-Hydrolases 45 202 IPR029058 -
Vifa2g02122 615 Pfam Enhanced disease susceptibility 1 protein EP domain 412 609 IPR041266 -
Vifa2g02122 615 Pfam Lipase (class 3) 52 199 IPR002921 GO:0006629
Vifa2g02122 615 Gene3D alpha/beta hydrolase 11 334 IPR029058 -
Vifa2g02122 615 Coils Coil 384 404 - -
Vifa2g02122 615 PANTHER PROTEIN EDS1-RELATED 7 611 IPR044214 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02122 Vifa-Chr2 549520958 549523049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02122 79 204 Acyl Lipid Metabolism Gene Families AT5G14930 30.709 1.77e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02122 K18875 - gmx:100778851 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02122 2 549520958 549523049 Vifa2g02122 2 549520958 549523049 ECH