Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02071 ATGGGAATGACAGAAGAAACCGTAGTGGCAGTTATCATGGTCGGAGGACCCACCAAAGGCACTCGATTCCGTCCATTATCATTCAACATTCCCAAACCACTCTTCCCATTAGCTGGACAACCCATGGTTCATCACCCTATCTCTGCTTGTCGAAAAATTCCTAATCTCGCTAGAATTTATCTCATTGGTTTCTATGAAGAACGTGAATTCGCATTATATGTATCGTCCATCTCCAATGAACTTAAAATCCCTGTTAGCTACTTGAAGGAGGATAAGCCTCATGGCTCTGCTGGTGGTCTTTATAACTTTAAAGATCTCATCATGGAAGAAGATCCGTCCCATATTTTTTTGCTCAATTGTGATGTTTGCTGCAGTTTTCCACTCCCACAAATGCTAGATGCACATAAAAAACATGGTGGTATGGGAACAATACTGGTTGTGAAGGTTTCTCCGGAGTCAGCTAGTGAATTTGGGGAATTGGTTGCTGATCCAGTCACCCATGAGCTCTTGCATTACACAGAGAAACCTGAAACTTTTGTTAGTGACCTTATAAACTGTGGTGTGTATATATTTACACCAGATATATTTACTGCCATTGAGGGTGTTTCTTCTAATTGGAAAGAAAGAGCTAACTTAAGGCGTGTCTCTAGCTTTGAAGCAATGGCGCCAGACTCAAGGAGTCATACGGAAAAATATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAACAGTTGTATATACATGAAACTTTGGACTTTTGGGAACAAATCAAAACTCCTGGAATGTCCATAAGATGTTCAGCCTTGTATCTTTCACAATTTCGTCACACTGCCCCCCATCTATTAGCAAATGGAGATGGTATTAAGAAAGCCTACATCAGTGGTGATGTTTATATTCATCCGTCAGCAAAAGTGAATCCGTCTGCAAAGATTGGTCCTGGTGTATCAATATCGGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTTATAAATTGTATAGTCCTTGATGATGTTGAAATCAAGGAAAATGCTGTAGTTCTTCATGCAATTGTTGGATGGAAATCCTCCATTGGACGATGGGCACGTGTCCAGGGTCATGGAGATTACAATGCAAAACTCGGCGTCACTATACTTGGTGAATCTGTTGCCGTCGAGGATGAGGTGGTGGTTATTAATAGCATTGTCCTTCCAAACAAGACCTTAAATGTTGGCGTTCAAGATGAGATTATTTTATAG 1248 0.4127 MGMTEETVVAVIMVGGPTKGTRFRPLSFNIPKPLFPLAGQPMVHHPISACRKIPNLARIYLIGFYEEREFALYVSSISNELKIPVSYLKEDKPHGSAGGLYNFKDLIMEEDPSHIFLLNCDVCCSFPLPQMLDAHKKHGGMGTILVVKVSPESASEFGELVADPVTHELLHYTEKPETFVSDLINCGVYIFTPDIFTAIEGVSSNWKERANLRRVSSFEAMAPDSRSHTEKYVRLDQDILSPLAGKKQLYIHETLDFWEQIKTPGMSIRCSALYLSQFRHTAPHLLANGDGIKKAYISGDVYIHPSAKVNPSAKIGPGVSISANARIGAGARLINCIVLDDVEIKENAVVLHAIVGWKSSIGRWARVQGHGDYNAKLGVTILGESVAVEDEVVVINSIVLPNKTLNVGVQDEIIL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02071 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Vifa2g02071 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Vifa2g02071 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Vifa2g02071 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Vifa2g02071 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 279 IPR029044 -
Vifa2g02071 415 Gene3D Hexapeptide repeat proteins 283 412 - -
Vifa2g02071 415 Pfam Nucleotidyl transferase 10 203 IPR005835 GO:0009058
Vifa2g02071 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02071 Vifa-Chr2 537991088 537995858 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02071 K00966 - gmx:100817201 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02071 2 537991088 537995858 Vifa2g02071 2 537991088 537995858 ECH