Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02067 ATGGAGTCACAATTTCTCTCAATTTCTCTCATCTTCATCTTCTTACTCCTCATTTCCTCCTCAAAACCAGCCCCATCTTCCACCATCGGCATTGATGCCATCTCCCGCATTCTTCAAATCCAAGACCGAGAAAGAGCTCCTCCGCCCGTCCAGGAAGCTGCTGCCCGCTCCGTCCTCCTCCGCTTCCTGCCTTCCCATTCCTCTTCCTTCCACTTCCGCATCCTCTCCAAGAAGCAATGCGGAGGTGAATATTGTTTCACTATCAATAATCATCCTTCTTCTGCAACACCAGGGAGTCCTCAAATTCGAATTGAAGGAACATCAGGAGTGGACATTGTTGCGGGTTTGCATTGGTATTTGAAGAATTGGTGTGGTTCACATATATCTTGGGACAAAACTGGTGGCCCCCAACTATTTTCAGTGCCCAATGTGGGGTTTCTGCCACGTGTCCACGATGCCGGAATCTCGGTTCAGAGGCCTGTTCCATGGAGCTATTACCAGAATGCTGTTACTTCTAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATAGACTGGATGGCTCTGCAAGGTGTCAACTTGCCCCTTGCATTTACGGGGCAGGAGGCTATCTGGCAGAAAGTTTTCAAAGAGAAGTTTAACATGAGCATTTCTAATTTGGATGATTTCTTTGGAGGCCCAGCATTTCTCGCATGGTCACGTATGGGAAACTTACATGGGTGGGGCGGACCACTTCCACAGAGCTGGTTTGATCAGCAATTAATTTTACAGAAGAAAATTCTTGCGAGAATGTATGAGCTCGGGATGACTCCTGTCCTGCCAGCTTTTTCTGGAAATGTCCCTGCTGCTCTGAAATATATATTTCCATCAGCAAAAATAACACGCTTGGGAAATTGGTTTTCTGTTAAGAGTGACCCCAAATGGACCTGCACTTATCTTCTTGATGCAACTGATCCCTTGTTTGTTGAGATCGGTAAAGCATTTGTTGAACAACAACTGCAAGAGTATGGAAGATCCAGCCACATATACAACTGCGATACCTTTGATGAGAACACCCCACCCGTTGATGATCCAGCGTACATTTCTTCATTAGGTGCAGCAATCTTTAAGGGAATGCAGAGTGGTGATAATGATGCTGTTTGGTTGATGCAGGGATGGCTATTTTCATATGATCCGTTCTGGAGACCTCCTCAAATGAAGGCGCTTTTGTATTCTGTTCCTGTGGGAAATCTGGTGGTTCTTGACCTGTTTGCTGAAGTTAAACCCATATGGACTACCTCAGAGCAGTTTTATGGTGTTCCTTACATCTGGAAACACACGTGGACTTTCCTACAAACTGTCTGGTGTATGCTGCACAATTTTGCAGGAAATTTTGAGATGTATGGGATATTAGATGCAGTAGCATCTGGTCCAATTGAAGCACGAACAAGTGTTAACTCAACAATGGTTGGAGTTGGAATGTCGATGGAAGGTATCGAACAAAATCCAATTGTTTATGATCTGATGTCTGAAATGGCATTTCAGCACAAGAAAATTGATGTTAAGGCTTGGGTTGATTTGTATTCAACTAGACGATATGGGAGACAAGTTCCTTTGGTACAAGAGGGATGGAATGTCTTGTATCATTCTATTTACAATTGCACGGATGGAGCCTATGACAAAAACAGAGATGTTATTGTAGCATTCCCAGATGTCGACCCTTCCTTACTTTCATTACATAATGAACACTCTCGTCCCTATACCAAGCCAAACTCAAGAACAATTATCCAGGAAGTAACTGATTCCTTTGATAGACCTCACTTATGGTATTCAACATCTGAAGTAATTTATGCATTGGAGCTTTTTATATCTAGTGGAGATGAACTTTCAAAAAGTAGTACTTATAGGTATGACCTAGTTGATCTCACCAGACAAGTTTTAGCAAAATACGCAAATCAGCTGTTCTATAAGGTCATTGAGGCATACCAATCACAAAATCTTCATGGAGTGACCCTACTCAGCCAAAGATTTCTGGACTTGGTGGAAGATTTGGACTCATTGTTGGCTTGCCATGATGGGTTTCTTCTAGGCCCCTGGTTAGATAGTGCAATACAATTAGCTCAAAATGAAGAGCAGAAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACACAGATGAGGAAGCCAGTCTGCTTCGTGACTATGGAAACAAGTACTGGAGTGGGGTTCTGCATGATTATTATGGCCCCAGAGCTGCTATTTATTTCAAATATTTAATCGAAAGCTTAGAGAAAGACGAGCATTTCAAGCTAAAGGAATGGAGAAGAGAGTGGATAAAACTTACGAATGATTGGCAAAGCCGTAGAAATATATTTCCAGTCGTAAGTAGAGGAGATGCTTTAAACACTTCTCGGTGGCTCTTCAACAAATACCTCAACCTTACCAATCCTGAGACACTGGAGAGCTGGACTGAACACCACTAA 2493 0.4292 MESQFLSISLIFIFLLLISSSKPAPSSTIGIDAISRILQIQDRERAPPPVQEAAARSVLLRFLPSHSSSFHFRILSKKQCGGEYCFTINNHPSSATPGSPQIRIEGTSGVDIVAGLHWYLKNWCGSHISWDKTGGPQLFSVPNVGFLPRVHDAGISVQRPVPWSYYQNAVTSSYSFAWWDWKRWEKEIDWMALQGVNLPLAFTGQEAIWQKVFKEKFNMSISNLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKSDPKWTCTYLLDATDPLFVEIGKAFVEQQLQEYGRSSHIYNCDTFDENTPPVDDPAYISSLGAAIFKGMQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLYSVPVGNLVVLDLFAEVKPIWTTSEQFYGVPYIWKHTWTFLQTVWCMLHNFAGNFEMYGILDAVASGPIEARTSVNSTMVGVGMSMEGIEQNPIVYDLMSEMAFQHKKIDVKAWVDLYSTRRYGRQVPLVQEGWNVLYHSIYNCTDGAYDKNRDVIVAFPDVDPSLLSLHNEHSRPYTKPNSRTIIQEVTDSFDRPHLWYSTSEVIYALELFISSGDELSKSSTYRYDLVDLTRQVLAKYANQLFYKVIEAYQSQNLHGVTLLSQRFLDLVEDLDSLLACHDGFLLGPWLDSAIQLAQNEEQKRQFEWNARTQITMWFDNTDEEASLLRDYGNKYWSGVLHDYYGPRAAIYFKYLIESLEKDEHFKLKEWRREWIKLTNDWQSRRNIFPVVSRGDALNTSRWLFNKYLNLTNPETLESWTEHH 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02067 830 Gene3D Glycosidases 160 513 - -
Vifa2g02067 830 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 54 143 IPR024240 -
Vifa2g02067 830 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 521 813 IPR024732 -
Vifa2g02067 830 Gene3D - 27 153 IPR029018 -
Vifa2g02067 830 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 165 512 IPR024733 -
Vifa2g02067 830 Gene3D - 515 826 - -
Vifa2g02067 830 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 9 815 IPR007781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02067 Vifa-Chr2 537368326 537377818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02067 K01205 - gmx:100791160 1441.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02067 2 537368326 537377818 Vifa2g02067 2 537368326 537377818 ECH