Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02043 ATGGCAACAACACCTCACCCAGCCATGAAAAAATCATGGTCGAGGGGCTCCGACTCAACTCAGTTCGAATCTCCAGCACGTTTCTGCTCTCCCTTACGATGGGACGCAACAGACTCGCCGGAATACCGATCACCGGAAAACTCACCCGGAAAGTTGGTAGAAAATCCAATGGCAGTGGTAACCGTCAACAAGCCAAAACAGATTTCTCATGACAAACTCCCTGACCAACGGAAGCTGCCACCGGAGAATACTCTTGCGGTGCTCACCCGATCAGAGAGAGAGGAGCCTCAACGGCAGGTGACGAAAGTGGAGACAACAGAAAAAGGTGGTGAGCGGAGACCCAGACCGGCTCCGGTAAGCTGTACGGCGGAGGAGGTTACGAGAAAGGCGGGTTTAGGGTTCCGGCTATGCGAGGTGGTGGTGTGTCTAATTTCTTTTTCGGTTATGGCTGCAAATAAGACGCAAGGTTGGAGTGGGGACTCTTATGATCGTTATAAAGAATACAGGTATTGTTTATCAATGAATGTTATCGGATTTGCATACTCAGGATTACAAGCTTGTGATGTAGCCTTTCAACTAGTCACAGGAAAACACATGATCAGTCACCACCTTCGCTATCACTTTCAGTTCTTCATGGATCAGGTTGTGGCATATCTTCTGATGTCAGCATCATCCTCTGCAGCCACAAGGGTGGATGATTGGCAATCTAATTGGGGGAAAGATGAGTTCACTGAGATGGCTACTGTTTCAGTTGGAATGTCATTTCTAGCTTTTGTTGCATTTGCCATGAGCTCACTCATCTCTGGTTACATACTCTGTAACCGCCGCAACTCCATGTAA 840 0.481 MATTPHPAMKKSWSRGSDSTQFESPARFCSPLRWDATDSPEYRSPENSPGKLVENPMAVVTVNKPKQISHDKLPDQRKLPPENTLAVLTRSEREEPQRQVTKVETTEKGGERRPRPAPVSCTAEEVTRKAGLGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSMNVIGFAYSGLQACDVAFQLVTGKHMISHHLRYHFQFFMDQVVAYLLMSASSSAATRVDDWQSNWGKDEFTEMATVSVGMSFLAFVAFAMSSLISGYILCNRRNSM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02043 279 MobiDBLite consensus disorder prediction 90 114 - -
Vifa2g02043 279 MobiDBLite consensus disorder prediction 90 119 - -
Vifa2g02043 279 MobiDBLite consensus disorder prediction 1 57 - -
Vifa2g02043 279 Pfam Casparian strip membrane protein domain 127 260 IPR006702 -
Vifa2g02043 279 MobiDBLite consensus disorder prediction 63 82 - -
Vifa2g02043 279 PANTHER CASP-LIKE PROTEIN 4A4 122 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02043 Vifa-Chr2 532100289 532101442 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02043 - - gmx:100789870 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02043 2 532100289 532101442 Vifa2g02043 2 532100289 532101442 ECH
Vifa2g02043 2 532100289 532101442 Vifa2g02043 2 532100289 532101442 PCT