Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02038 ATGGCAAATCAATCATCTGAGCTAGCCATTGAACAACTCAAGAAACTTCTCAGTGAGAAAGAGGAACTTAATGAAGTGGCCACATCAAAAATTGAGGAGCTTATAGTTGAGTTGCAGAAATTGGGATGTCATCCACACCAAACTCCTGCTGAGAAGAGAATCATTGATGGCTTTGCTCATTTCAAGCACACTAACTTTGACAAGAATCCGGAGTTGTATGACCGACTTGCTAAGGGACAATCCCCCAAGTTTATGGTATTTGCTTGCTCCGACTCTAGAGTGAGTCCTTCAATTATTCTGAACTTTCAACCTGGTGAAGCTTTCGTGGTCAGAAACATTGCTAACTTGGTTCCTCCATTTAATCAGTTAAGATATAGTGGAGTTGGTGCAACAATTGAGTATGCTATTACAGCTCTAAAGGTTGAAAACATCTTGGTTATTGGACATAGTCGCTGCGGCGGAATATCGAGGCTAATGAGTCATCCAAATGATGGTTCGGCTCCATATGACTTCATAGATGATTGGGTGAAAATAGGTTTTTCTGCCAAAGTGAAGGTGCTGAAAGAATATCCAAACCATGATTTCAAAGAACAATGCAAATTCTGTGAAGTGGAATCAGTGAAACACTCATTAGTAAACCTGTGGACATATCCATATGTTGTTACAGGAATAAAGAACAAGAATTTAGCATTGTTGGGAGGTTACTATGATTTTGTGAAAGGAGAATTCAAGCTTTGGAAGCAGGAGTCTCATGCATGA 759 0.3979 MANQSSELAIEQLKKLLSEKEELNEVATSKIEELIVELQKLGCHPHQTPAEKRIIDGFAHFKHTNFDKNPELYDRLAKGQSPKFMVFACSDSRVSPSIILNFQPGEAFVVRNIANLVPPFNQLRYSGVGATIEYAITALKVENILVIGHSRCGGISRLMSHPNDGSAPYDFIDDWVKIGFSAKVKVLKEYPNHDFKEQCKFCEVESVKHSLVNLWTYPYVVTGIKNKNLALLGGYYDFVKGEFKLWKQESHA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02038 252 Gene3D Carbonic anhydrase 44 252 IPR036874 GO:0004089|GO:0008270
Vifa2g02038 252 SMART Pro_CA_2 77 247 IPR001765 GO:0004089|GO:0008270
Vifa2g02038 252 CDD beta_CA_cladeB 57 246 IPR045066 GO:0004089|GO:0008270
Vifa2g02038 252 FunFam Carbonic anhydrase 46 252 - -
Vifa2g02038 252 Pfam Carbonic anhydrase 85 242 IPR001765 GO:0004089|GO:0008270
Vifa2g02038 252 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 133 153 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vifa2g02038 252 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 89 96 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vifa2g02038 252 Coils Coil 3 37 - -
Vifa2g02038 252 PANTHER CARBONIC ANHYDRASE 29 249 IPR001765 GO:0004089|GO:0008270
Vifa2g02038 252 SUPERFAMILY beta-carbonic anhydrase, cab 44 248 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02038 Vifa-Chr2 530904209 530905832 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02038 K01673 - gmx:547671 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02038 2 530904209 530905832 Vifa2g02038 2 530904209 530905832 ECH