Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02036 ATGGATTCAACTTCAACATTCCCTCAACAACAAGAGATGCACGATCTTCATGCCGAAGACTCCTCCACTGTTTCCGATTGCGAGAGCGGTGTTTCCGGCAACACCAGAGAGTTACAACTGAGTTCCGACTCGTTTTTAGTTAGGCTTGGAGAAGGCGATGTTGTTCATGACCTAATAAAGACCAGATTCCTTCGCGGACTCGGTTTACTTGCGAACCAAACCGAGATTCTCGCCGTTCACAGAAACGCCTGTTCCGACGTCGTTTCACAAGCGCGCCTTCAATCCTTTCACGTTTATGCAGGAGCTGTTTCTAAACTTCGCGGTGGAGATTCGAACGTGAAATACGCTTGGTACGGAACTTCCTGTGAGAATGACGTAAGAGACATTCTTTCAAACGGTTTTAGTCATGTCCACGGTCATAGCCTGTGCCTCTCTCCAGATGATTCTCCTCTCCAAAGTGTGAAAAGTTGTTTTGTTGGAAGAGATGGTGTGAGGCATTTGATTTTGTGTAGGGTGATTTTAGGAAGAACGGAGATTGTGAAGCCTGACACCAAACAATGTTATCCGAGTAGTGAGAATTATGATTCTGGTGTGGATAGTTTTTCAGCCCCAACGAAGTACATGATTTGGAGTAGTAGAATGAACACTCATGTTTGGCCTGCTTATGTTATAAGCTTCAGGGTTCCTTCATTCAAAGGGATTGAGATGAATGAAGAAGAACATGTGAGACCAACTTCACCTTGGATGCCGTTTCAAAATTTAATTTCTGTGCTCTCCAAGGATTTGCCATCGCTTGATATTGCTTTGATTTCCAAGTTCTACAAAGCTAAAAAGGAAAAGAAGATTTCACGACATGAATTGATACAAAAAGTGAGACAAATTGCTGGAGATAAGTTGCTGATTTCGGCCATCAAGTCTTACAGAGCAAAGAAGAAACCTACAAAGTTTCAGCAAACAAGGTCAAAGAATGACAACTAG 978 0.4284 MDSTSTFPQQQEMHDLHAEDSSTVSDCESGVSGNTRELQLSSDSFLVRLGEGDVVHDLIKTRFLRGLGLLANQTEILAVHRNACSDVVSQARLQSFHVYAGAVSKLRGGDSNVKYAWYGTSCENDVRDILSNGFSHVHGHSLCLSPDDSPLQSVKSCFVGRDGVRHLILCRVILGRTEIVKPDTKQCYPSSENYDSGVDSFSAPTKYMIWSSRMNTHVWPAYVISFRVPSFKGIEMNEEEHVRPTSPWMPFQNLISVLSKDLPSLDIALISKFYKAKKEKKISRHELIQKVRQIAGDKLLISAIKSYRAKKKPTKFQQTRSKNDN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02036 325 ProSiteProfiles RST domain profile. 242 313 IPR022003 -
Vifa2g02036 325 SUPERFAMILY ADP-ribosylation 46 229 - -
Vifa2g02036 325 Pfam RCD1-SRO-TAF4 (RST) plant domain 243 308 IPR022003 -
Vifa2g02036 325 ProSiteProfiles PARP catalytic domain profile. 32 248 IPR012317 GO:0003950
Vifa2g02036 325 Gene3D - 45 228 - -
Vifa2g02036 325 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 22 309 IPR044964 -
Vifa2g02036 325 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02036 Vifa-Chr2 529502639 529504939 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02036 - - pvu:PHAVU_009G178500g 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02036 2 529502639 529504939 Vifa2g02036 2 529502639 529504939 ECH
Vifa2g02036 2 529502639 529504939 Vifa2g02036 2 529502639 529504939 PCT