Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02027 ATGGCTGATTTGGTTCAAGAGGAACAAAAGGTTCTTGGAATTGACGAAACTGAATCTGAGGGAAACAACAACAAGCGTCTACATTTGGAGGGTCAAGGAGACAAAGATATGCAAGGGAATCCGATTCATAGATCTAGTTCAAGGCCTCAACTTGATGTTAGTAAAGCTCAAATTCAATCTAATGTGGAGGATAAGTATCCTACTATCTTGTTGCCTAATCAATCTGATGATTTGTCCCATCTAGCTCTTGATATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACACGAAGGCCAATCAGATGATGATAAAAGGAAGAAAAGTTTAAAGGAGCGATTAGGGCTTTCTAATGGTAATAGAAGAAGCTTTCCTATTCTTGGTGGAAGGCTTCATTTTGTGAAGTTTGAAACAAGAAAGATCAACGAGTGCTTAGATTTCATTCATTCAAAGCAGCTTCACCGTGGGTTGGAGTCACGTTACCCAGATGCCGCGGCTAATGAAAATGCCATAATTAAGGCTACTGGAGGTGGAGCATACAAGTATACTGACCTTTTCAAAGAAAGACTCGGGGTTAGTCTTGACAAAGAAGATGAAATGAACTGTCTTGTGTCAGGAGCAAATTTCTTGCTTAAGGCAATTCGACATGAAGCTTTCACACACATGGAGGGCAAGAAAGAGTTTGTTCAAATTGACCATAATGATTTGTTCCCTTATCTTCTGGTTAACGTTGGTTCCGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAGTTTGAGAGGGTTAGTGGGACAAACGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTGTTAACAAAATGCAAGAGCTTTGATGAGTTGCTTGAGCTAAGCCAGAAAGGAGATAATAGAGCCATTGACATGCTTGTTGGGGACATTTATGGTGGTTTGGATTATTCTAAGATTGGTCTATCGGCTTCGACTATTGCTTCAAGTTTTGGGAAAACTGTATCAGAAAAAAAGGAGCTTGAAAACTACAGGCCTGAAGACATATCACTCTCTCTTCTAAGGATGATTTCGTACAATATTGGCCAGATAGCTTACTTAAACGCATTGCGATTTCGGTTGAAGAGAATATTTTTTGGAGGATTTTTCATCAGGGGTCATGCTTATACAATGGACACTCTTTCTTTTGCTGTTCAATACTGGTCTAATGGGGATGCACAGGCAATGTTTTTGCGACATGAAGGCTTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAAGAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCAATGGGTGCTCCATATACTGGAGGCAAGATACATGGCCCACCACTTGGAGATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTACAAATGGGAACAGAAATTACTGCACCTGTACCGATGACTCCTGTTGCTGGAACTACTGGACTTGGGGGTTTTGAAGTCCCTTTGTCAAAAGGAAGTGCTCTGCGATCTGATGCGAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGAAGTGTTTCCATTGTTAGCAGACCCTAAATTGTATGAGCCCAATACAATAGATCTTGCAGATCCCAGTGAATTAGAATATTGGCTCACAATTTTGTCAGAGCACTTGCCAGATCTTGTTGACAAGGCTGTTGCTAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCCCACTTGGCAAGGTTGATGGAGGAGCCTTCTGCATATGGGAAGTTAGGTCTGGCCAATCTACTGGAAATGAGGGAAGAGTGCTTGAGGGAATTCCAGTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAAGCATCGCTTGCCGTTTTACCTGACTTGTTTGTGGAACTTGATGGCATGGATGAGGAAACGAGATTGCTTACTCTAATTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCTTGTGTGGATCTCTATCATAAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGCAGACCATGGCGGGTGGATGACTTTGATGTCTTCAAAGAGAGACTGTTAGGGTCCGGAAGCAAGAAGAAGCCCCCTCATAGAAGAGCTTTACTTTTTGTTGATAATTCAGGTGCTGACATTGTTCTAGGGATGCTCCCTCTGGCTCGGGAGCTCCTTCGTCGTGGAACTGAAGTAGTTCTGGTTGCAAACTCGTTACCTGCTTTAAATGACGTGACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAAGCATTGCGATATTCTAAGGCGAGCTGCTGAAGCTGGAGGCCTGCTTGTTGATGCGATGATTAATACAGATAGCTCTAAAGAAAATTCAACTTCGGTCCCCTTGATGGTTGTTGAGAATGGATGTGGTAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGTTGGCTGCTGCTGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGATCTCTACATACTAACCTCTATGCTGAGTTTAAATGTGATGCTTTGAAGCTTGCGATGGTGAAAAATCAGAGATTGGCTGAAAAGTTGATTAAAGGGAACATATATGACTGTATTTGCAAATACCAGCCTTCTAGTTGA 2700 0.4211 MADLVQEEQKVLGIDETESEGNNNKRLHLEGQGDKDMQGNPIHRSSSRPQLDVSKAQIQSNVEDKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEGQSDDDKRKKSLKERLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHRGLESRYPDAAANENAIIKATGGGAYKYTDLFKERLGVSLDKEDEMNCLVSGANFLLKAIRHEAFTHMEGKKEFVQIDHNDLFPYLLVNVGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRAIDMLVGDIYGGLDYSKIGLSASTIASSFGKTVSEKKELENYRPEDISLSLLRMISYNIGQIAYLNALRFRLKRIFFGGFFIRGHAYTMDTLSFAVQYWSNGDAQAMFLRHEGFLGALGAFMSYEEHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQMGTEITAPVPMTPVAGTTGLGGFEVPLSKGSALRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLADPSELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLFVELDGMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDVFKERLLGSGSKKKPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTDSSKENSTSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLYAEFKCDALKLAMVKNQRLAEKLIKGNIYDCICKYQPSS 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02027 899 NCBIfam type II pantothenate kinase 80 422 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vifa2g02027 899 SUPERFAMILY Actin-like ATPase domain 190 422 IPR043129 -
Vifa2g02027 899 FunFam Pantothenate kinase 2 218 403 - -
Vifa2g02027 899 FunFam Pantothenate kinase 2 72 231 - -
Vifa2g02027 899 SUPERFAMILY Actin-like ATPase domain 79 218 IPR043129 -
Vifa2g02027 899 MobiDBLite consensus disorder prediction 1 53 - -
Vifa2g02027 899 SUPERFAMILY AF1104-like 516 897 IPR036075 -
Vifa2g02027 899 PANTHER PANTOTHENATE KINASE 50 792 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vifa2g02027 899 MobiDBLite consensus disorder prediction 39 53 - -
Vifa2g02027 899 FunFam Pantothenate kinase 2 536 622 - -
Vifa2g02027 899 Gene3D - 535 622 IPR035073 -
Vifa2g02027 899 Gene3D - 301 412 - -
Vifa2g02027 899 FunFam Pantothenate kinase 1 80 217 - -
Vifa2g02027 899 Pfam Fumble 80 421 IPR004567 GO:0004594|GO:0005524|GO:0015937
Vifa2g02027 899 PIRSF PanK_long 34 899 IPR015844 GO:0004594|GO:0015937
Vifa2g02027 899 MobiDBLite consensus disorder prediction 9 33 - -
Vifa2g02027 899 Pfam Damage-control phosphatase ARMT1-like domain 607 885 IPR002791 -
Vifa2g02027 899 Gene3D - 72 231 - -
Vifa2g02027 899 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 701 897 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02027 Vifa-Chr2 527698206 527709584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02027 K24265 - gmx:100781580 1579.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02027 2 527698206 527709584 Vifa2g02027 2 527698206 527709584 ECH
Vifa2g02027 2 527698206 527709584 Vifa2g02027 2 527698206 527709584 PCT