Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02026 ATGCTGAGAATCGCAGCGTGCGCAAAGAAACTCGTAGGAACGGCGTCGTTTGAAGCGCCGATTCCCGCCGCTAGGGTTCTTCCACGATTCTACCACGAGAGGGTGGTGGATCATTACGATAATCCCCGGAATGTTGGATCCTTCGATAAGAACGACCCGACGGTAGGTACTGGTCTTGTCGGAGCACCCGCGTGCGGTGATGTTATGAAGCTCCAAATTAAGGTTGATGAGGTCACCGGAAAAATCGTCGATGCTCGCTTTAAAACCTTTGGATGTGGATCCGCCATTGCTTCCTCATCCGTCGCTACTGAATGGGTTAAGGGAAAGCAAATGGAAGAGGTTTTGACCATTAAGAACACTGAGATTGCAAAGCATCTTTCACTCCCACCAGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAAAAAGCCTCCGCTGCTGCTGCCACTGCGTGA 489 0.4949 MLRIAACAKKLVGTASFEAPIPAARVLPRFYHERVVDHYDNPRNVGSFDKNDPTVGTGLVGAPACGDVMKLQIKVDEVTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKKASAAAATA 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02026 162 FunFam Iron-sulfur cluster assembly scaffold protein IscU 29 157 - -
Vifa2g02026 162 SUPERFAMILY SufE/NifU 30 154 - -
Vifa2g02026 162 Gene3D - 30 162 - -
Vifa2g02026 162 Pfam NifU-like N terminal domain 31 155 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vifa2g02026 162 NCBIfam Fe-S cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
Vifa2g02026 162 CDD IscU_like 31 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Vifa2g02026 162 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 19 160 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02026 K22068 - gmx:100806169 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02026 2 527223047 527224728 Vifa2g02026 2 527223047 527224728 ECH
Vifa2g02026 2 527223047 527224728 Vifa2g02026 2 527223047 527224728 PCT