Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02019 ATGAACGGATCTCCGGATCCGTTGGATTCGTTTCCTCGCTTACGTGTTCGCCAATCGGACGCCACGTCTCGCCGTTCATCATCCTTCGGCGCCGATTCCGAGTTGGAACGTTACTGTAGCGCTAACTCGGTGATGGGAACACCGAACACCAGTATGAGCATGTGCAGTGCCGTAACCGTTTTTCATGATTTCTCTGATATCGATTTTGGTTCTTCCAGAAGCTTCGATGATGGAATTAATCGGAAGGATTTTAGGTTTAGTGGATTGGAATTGTACGGTGACGGTGGTGACGACGGTGATGAGCTAGAGATTGATTCGTCGGAGTTGATTGGAAATAAACGGAGTGAGGAATCTGATGGGAAGGGAAATGAGGGTGAAGTTGGGGGAAGGGAGATTGAGATGGAAGAGGATGAGGAGTTTTCGGAAGGTGAGGATTCTATGTTTAACTATGGGAGTGGATGTGAGGGTGATAATGAGAATGAGAATGAAAATGAGAAGAATGAATTCTATTCCTCGAGGAGGGTTCGATTTTACGAGGAGACGGAAGTTCGAAATGAGAATCCGTTGTTTATGAATTCTTCTGTTGCTTTTGGTTCTCATGATTTGGATGATTTTTTGATTGAAAACGGTTCAGTTTCTGTAGAGGAAGATCTGTTTCAGAATCCGCGAGAAAATAATAATCGATTTCAAGAGAATGAGGTAAGTTCCAGTCAAAAAGAGGAGGGGAGTGAGGTCATTGTTAATGATGAAGTTGAAGAAACAAAAGATACTGGTGATCGAGAAGCTTTAGAAGAGGTAAGGGATAGGGAGAGGAAAATTCCAGTTGCTTGTTGTGAGGAAGTTCAAGGTGCTGACAAATTGGTTGGTTGTTTTAAAACGGATGATTTGGGTCCGCTGCCAGAAGAAGATCCTCAGAAGAGTTTGAATATCACCGATGGTGGAAGTGAGGGAAAAGGGAATGGAAATGCAAATGCAAAATCATTTGAGAACCTTAAACCAATTGTGCTACCATCAAATGGTGGAACGGGGCAAACATTAGAGAGGACTTCCACTTCAACAAATGTATTAGAAAAAAGTCATGTGGTATCTAAGATAGAGGACCTTGAGCTAAATGAATTCTATGACGAGGTTGTTCAGGACATGGAAGAAATTTTACTGGAGTCTAGGGATTCTCCTGCGGCTAGGTTTTCCATGGATGATGCTTATCTGCTAGTTCAGCGCCCAAGAAGAATAGATAGGATTGAAGTGGTAGGTGCAAGGCAGAAAACAGGTGATGTTTCTTTCAGTGAAAGATTGGTTGGGGTGAAGGAATACACTGTTTATAAAATAAAAGTGTGGGGTGGCAAGGATCAGTGGGAGGTTGAAAAGCGATACCGTGATTTCTTAACTCTTCACCGTTGTATGAAAACCTTATTCAACGAGCAAGGCTGGACTTTACCTTTGCCTTGGTCTTCTGTTGAAAAGGAATCAAAGATATTTAGAAGTGCATCTCTTGATATTATTGCGAAGAGAAGTGTTCTCATTCAAGAGTGTCTACAGTCTATTCTCTCTTCCAGGTTCTTCTCAAATCCTCCAAGAGCACTAGTTTGGTTTTTATCCCCTGAAGATTCACATCTTAGTTCACCCGTGTCAAATTCACCAGTGTCTCTCTCTTCTTTTACAAGAGGGGAAAGCATTCGAAACTTTTCCACGTGGGGGAAGACCATATCACTTATTGTTGAAATCCCATCAAATAAATCAACGAGGCAGCTTTTAGAGGCCCAACATCACAGATGCGCTGGATGCCATAAGCATTTTGATGATGGAAATAATTCAATTTGGGATTTTGTACAAACATTTGGATGGGGGAAGGCTCGACTTTGTGAATATACTGGTCAACTGTTCTGTTCTTCTTGCCATACAAATGAGACTGCAGTCTTGCCAGCAAGGGTTTTACACCACTGGGATTTCACTCATTATCCTGTATCTCAGCTGGCAAAGTCATATCTGGATTCTATACATGAACATCCCATGCTATGTGTCACCGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTGCTTCATGTTATGAATGTCAGGAAAAAGATAGGAACGATGCTTCCATATGTTCGCTGCCCATTCCGGAGATCTATCAACAGAGGTGTTGGAAATCGGAAATATCTTCTTGAAAGCAATGATTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAAAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTGTGTCGAGGAAAATCCTGGAACACATTACTGATCAATGCCTTGTATGCTGTGATGTGGGAAACCCGTGTAGTGCCCGACAAGATTGCAGTGACCCATCCTCCCTCATTTTTCCATTTCAGGAAGATGATATTGAAAGGTGCAAATCTTGTCAGTCAGTTTTCCATAAGCCTTGCTTTAAAAAGCTTGTAAGTTGTCCTTGTGGGGAACAGCTCGGACTGAACAAGACAAGGCGTTTAAGTAACAGAGCAAGCCAGTGGGGAGGTTTAGGCAAGGGACTGAGTTCCGGGCTGTCACCTAAGTTTCTCTCTGGATTATTTTCGAAAGAAAGGCCTGAGAAAACAAGGGAGCATCAAAGCGAAAATACCATCTTAATGGGTTCCTTACCAGGCAATTCTTTGTGA 2658 0.4259 MNGSPDPLDSFPRLRVRQSDATSRRSSSFGADSELERYCSANSVMGTPNTSMSMCSAVTVFHDFSDIDFGSSRSFDDGINRKDFRFSGLELYGDGGDDGDELEIDSSELIGNKRSEESDGKGNEGEVGGREIEMEEDEEFSEGEDSMFNYGSGCEGDNENENENEKNEFYSSRRVRFYEETEVRNENPLFMNSSVAFGSHDLDDFLIENGSVSVEEDLFQNPRENNNRFQENEVSSSQKEEGSEVIVNDEVEETKDTGDREALEEVRDRERKIPVACCEEVQGADKLVGCFKTDDLGPLPEEDPQKSLNITDGGSEGKGNGNANAKSFENLKPIVLPSNGGTGQTLERTSTSTNVLEKSHVVSKIEDLELNEFYDEVVQDMEEILLESRDSPAARFSMDDAYLLVQRPRRIDRIEVVGARQKTGDVSFSERLVGVKEYTVYKIKVWGGKDQWEVEKRYRDFLTLHRCMKTLFNEQGWTLPLPWSSVEKESKIFRSASLDIIAKRSVLIQECLQSILSSRFFSNPPRALVWFLSPEDSHLSSPVSNSPVSLSSFTRGESIRNFSTWGKTISLIVEIPSNKSTRQLLEAQHHRCAGCHKHFDDGNNSIWDFVQTFGWGKARLCEYTGQLFCSSCHTNETAVLPARVLHHWDFTHYPVSQLAKSYLDSIHEHPMLCVTAVNPFLLSKVPALLHVMNVRKKIGTMLPYVRCPFRRSINRGVGNRKYLLESNDFFALRDLIDLSKGVFAALPVMVETVSRKILEHITDQCLVCCDVGNPCSARQDCSDPSSLIFPFQEDDIERCKSCQSVFHKPCFKKLVSCPCGEQLGLNKTRRLSNRASQWGGLGKGLSSGLSPKFLSGLFSKERPEKTREHQSENTILMGSLPGNSL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02019 885 MobiDBLite consensus disorder prediction 130 144 - -
Vifa2g02019 885 MobiDBLite consensus disorder prediction 298 326 - -
Vifa2g02019 885 ProSiteProfiles PX domain profile. 419 538 IPR001683 GO:0035091
Vifa2g02019 885 MobiDBLite consensus disorder prediction 223 245 - -
Vifa2g02019 885 SMART DUF4206_2 619 835 IPR025258 -
Vifa2g02019 885 MobiDBLite consensus disorder prediction 108 146 - -
Vifa2g02019 885 Pfam PX domain 446 533 IPR001683 GO:0035091
Vifa2g02019 885 MobiDBLite consensus disorder prediction 1 32 - -
Vifa2g02019 885 Pfam Putative zinc-RING and/or ribbon 619 822 IPR025258 -
Vifa2g02019 885 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 27 827 - -
Vifa2g02019 885 MobiDBLite consensus disorder prediction 308 326 - -
Vifa2g02019 885 MobiDBLite consensus disorder prediction 861 885 - -
Vifa2g02019 885 MobiDBLite consensus disorder prediction 108 129 - -
Vifa2g02019 885 Gene3D - 427 539 IPR036871 GO:0035091
Vifa2g02019 885 CDD PX_domain 426 525 - -
Vifa2g02019 885 SUPERFAMILY PX domain 431 538 IPR036871 GO:0035091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02019 - - gmx:100800081 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02019 2 525143799 525151080 Vifa2g02019 2 525143799 525151080 ECH