Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02018 ATGGCTCAAACCGTTTTCTCCTCCTCAGTCTTTTCTCCTTCCTTCCCTCATCGTCATCTCCCGAACCTCAACCTCCGAACCTCATCCCTAACCTATCATCTTTCTTCTCCGATTCACCGAACCACCACTTCCATTGCCGCTGCTAACGTTTCCGTTGCTCCGAATGCCATTACGTCGGTTCAGTCTGTTCCTCAGCTTATTGAGTCGTTGATTAGTGGCGTTGATTTGACGGAAGCTGAAGCTGAATCGTGTCTTCATTTGCTGTTGAATGAAGCTAGTGAAGCTTTGATTAGCGCTGTTCTTGTGCTTTTGAGAGCTAAAGGAGAAACTGTTGAAGAAATTGCGGGGCTGGCGAAGGCTATGATGAAACATGCTACAAAGGTTGAAGGTTTAGGTGATGTGGTTGACATTGTTGGCACGGGAGGGGATGGTGCAAACACGGTTAACATTTCAACAGGGGCTTCCATTCTTGCTGCTGCTTGTGGTGTAAAAGTTGCCAAGCAAGGAAGCCGGTCCAGTTCTTCTGCATGTGGAAGTGCTGACGTGTTAGAAGCATTAGGAGTTGTTATCGACTTGGGTCCTCAGGGGATTAAGAAGTGTGTGAATGATGTGGGAATCGGGTTTATGATGTCTCCAAGGTATCACCCTGCAATGAAGGTTGTCAGGCCTATAAGAAAGAAGCTGAAAGTAAGAACTATATTTAATATCTTGGGTCCGATGTTAAATCCAGCACAAGCACCTTTTGCAGTTGTTGGTGTATACAAAGAAGATTTGGTCTTCAAAATGGCCAAAGCGCTTAATAGATTTGGCATGAAAAGAGCTTTAGTTGTCCACTCTGAAGGCTTGGATGAAATTACTCCTATGGGACCTGGTCTAGTACTTGATGTTACTTCAGAAAGGATTGAAAAATTCTCATTTGATCCCTTGGAGTTTGGCATTCCTAGGTGCAGTCTTGAAAGCTTAATAGGTGGTGACCCAGAATACAATGCAGAGGTTCTCAAACGTGTTCTGGGTGGAGAGAAAGGACCTATTGCAGATGCTTTTATTCTCAATGCGGCAGCAGCTCTCATGGTCAGTGGCTTTGTGAGGAACCTACATGAAGGGGTTTCTTTGGCGCGTGAAACACAACAATCAGGAAAAGCTCTCAAGACTCTCAACTTGTGGAAGGATATCTCAAATCAAATAAAAGCTGACGCTGCCATATAA 1206 0.4469 MAQTVFSSSVFSPSFPHRHLPNLNLRTSSLTYHLSSPIHRTTTSIAAANVSVAPNAITSVQSVPQLIESLISGVDLTEAEAESCLHLLLNEASEALISAVLVLLRAKGETVEEIAGLAKAMMKHATKVEGLGDVVDIVGTGGDGANTVNISTGASILAAACGVKVAKQGSRSSSSACGSADVLEALGVVIDLGPQGIKKCVNDVGIGFMMSPRYHPAMKVVRPIRKKLKVRTIFNILGPMLNPAQAPFAVVGVYKEDLVFKMAKALNRFGMKRALVVHSEGLDEITPMGPGLVLDVTSERIEKFSFDPLEFGIPRCSLESLIGGDPEYNAEVLKRVLGGEKGPIADAFILNAAAALMVSGFVRNLHEGVSLARETQQSGKALKTLNLWKDISNQIKADAAI 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02018 401 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 133 388 IPR035902 -
Vifa2g02018 401 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 52 129 - -
Vifa2g02018 401 Hamap Anthranilate phosphoribosyltransferase [trpD]. 65 391 IPR005940 GO:0000162|GO:0004048
Vifa2g02018 401 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 63 128 IPR036320 -
Vifa2g02018 401 NCBIfam anthranilate phosphoribosyltransferase 67 389 IPR005940 GO:0000162|GO:0004048
Vifa2g02018 401 Pfam Glycosyl transferase family, helical bundle domain 65 125 IPR017459 -
Vifa2g02018 401 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 131 400 IPR035902 -
Vifa2g02018 401 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 60 393 IPR005940 GO:0000162|GO:0004048
Vifa2g02018 401 FunFam Anthranilate phosphoribosyltransferase, chloroplastic 48 129 - -
Vifa2g02018 401 FunFam Anthranilate phosphoribosyltransferase 129 394 - -
Vifa2g02018 401 Pfam Glycosyl transferase family, a/b domain 133 382 IPR000312 GO:0016757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02018 K00766 - gmx:100794615 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02018 2 525099224 525102638 Vifa2g02018 2 525099224 525102638 ECH