Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02017 ATGGGTTCTATATTGAGTTCTCAGAATACTCAAATGAGTAAAGAAGTGATGGAAACGTCTTTGAGTAAAGCGAAAGAGCTCGCTGCTTCTTCCCCCGTCTTTCTCTTCAGTAAGACTTATTGTGGTTACTGCAAACGGGTGAAGGATCTGCTCAAACAGCTAGGAGCAACCTACAAGGTCCTTGAATTGGATATAGAAAGTGACGGTGGTGAGATTCAAGCAGCTTTAGCTGAGTGGACCGGACAAAGAACAGTACCTAACGTCTTTATTGGAGGCAAGCACATTGGTGGTTGTGATTCTGTTTTGGAGAAACACCGTGCAGGTCAATTGGTTCCCCTTCTCACTGATGCCGGAGCGATTGCTAATAACTCTGCTCAGCTCTAA 384 0.4479 MGSILSSQNTQMSKEVMETSLSKAKELAASSPVFLFSKTYCGYCKRVKDLLKQLGATYKVLELDIESDGGEIQAALAEWTGQRTVPNVFIGGKHIGGCDSVLEKHRAGQLVPLLTDAGAIANNSAQL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02017 127 NCBIfam glutaredoxin 33 113 IPR011899 -
Vifa2g02017 127 FunFam Glutaredoxin 2 18 127 - -
Vifa2g02017 127 PANTHER GLUTAREDOXIN 2 9 120 - -
Vifa2g02017 127 CDD GRX_GRXh_1_2_like 32 113 - -
Vifa2g02017 127 Gene3D Glutaredoxin 12 127 - -
Vifa2g02017 127 PRINTS Glutaredoxin signature 33 51 IPR014025 -
Vifa2g02017 127 PRINTS Glutaredoxin signature 78 91 IPR014025 -
Vifa2g02017 127 PRINTS Glutaredoxin signature 92 105 IPR014025 -
Vifa2g02017 127 SUPERFAMILY Thioredoxin-like 22 120 IPR036249 -
Vifa2g02017 127 ProSiteProfiles Glutaredoxin domain profile. 21 121 - -
Vifa2g02017 127 Pfam Glutaredoxin 33 95 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02017 Vifa-Chr2 524142392 524144329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02017 16 120 Miscellaneous Gene Families AT3G02000 41.441 2.20e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02017 K03676 - pvy:116146498 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02017 2 524142392 524144329 Vifa2g02017 2 524142392 524144329 ECH