Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02014 ATGGCGAGTGTGGAAATTGTTGATTTGTCTAGTGATGATGAAAGTGAAAAGGCCGTTCCGATTGCGGTTAAATTGGAGCCGGGGTATGTTACGGCTGCAGAGAGAGAGCGCGTGAGTGGTGATCGGAGACTAGTCAAATGTCATAGTTATTCTAGTGTGTTGGAGCAGGGACCGTCGCCAATTGATGATACTGGCATTTCGTATGCATCATCCGTTTGTGCCGCACCCCTCTCCAGGCAGTTTTGGAAAGCTGGGAGCTATGATGACAGACAAGGTTCTCAAATGTCAGTTAAAGATGGAAATAACTATCTACATGTACACCCCATGTTCCTTCACTCAAATGCAACTTCGCACAAGTGGGCATTTGGCGCCCTAGCAGAGCTTCTTGATAATGCTGTTGATGAGATCCAAAATGGGGCTACCTTTGTCAGTGTAGATAAAATTTCAAATCCAAGAGATGGAAGTCCTGCATTATTGATTCAAGATGATGGCGGTGGCATGGATCCGGAAGCAATGCGTCGCTGCATGAGCTTTGGATTTTCAGATAAAAATTCAAAGCTTGCTATTGGACAGTATGGAAATGGCTTCAAGACCAGCAGTATGAGGCTTGGTGCAGATGCTATAGTCTTCAGTCGCCATCTGAATAATGGGATTTTGACTCAAAGCATTGGACTTTTGTCATATACATTTCTGATGCAGACACAACTTGACAGAATAGTAGTACCAATGGTGAATTATGAGTATAATACCTCAACTTCATCGCTGGATGTGTTAAATGGCAAAGAACATTTTATGGCAAATTTAGAATTGCTGTTGCGTTGGTCACCATATTCATCCGAAGCCGATCTTCTGAAACAATTTCAAAACATGGGATCTTACGGTACTAAAGTTATTGTCTACAATTTGTGGTTCAATGATGAAGGGATTACTGAGTTAGATTTTGATACAGATCCCAAGGATATTCGCATTGCTTGGGATGTCAAGAAGATCAGTACTATACCTACACGGAAGAGAATCCAAGAGGAACATATTGCAAAAACATTTCGTTACTCATTACGTGTGTACTTGTCCATACTGTACTTGCGGTTACCAAAAACTTTCCAAATTATATTGAGAGGGCAAGCTGTGAAGCCCCATAGCATTGCTGACGATCTTAAACTTGTTGAATTTATCAAATATACACCACAATGTGCTGGACCTGTAGAGGAACTTTTTGTAACAATTGGATTTCTTAAGGAAGCCCCTCATGTCAATATACATGGTTTCAATGTGTATCACAAACATCGGCTGATACTGCCATTTTGGCAGGTTGTAAGATATTCAGACAGTAGAGGCAGAGGAGTTGTTGGTATCATGCAAGCAGATTTTGTTGAGCCAACTCATGATAAACAAGATTTTGAGAGAACTTCCTTGTTTCAAAAGCTAGAAGCGCGATTAAAGTCAATGACATGGGAGTACTGGAATATAGAGAAAGGGAAATTGGAAGGAACTTGCGATTTTTTATTGATAGAACAAATGAAATACAAACTGAAAAACTACAAGAGCAGTTTGCTCTCTCAGAAGATAACTTCTTCTGGCCTAGTAACTTCCAAATAA 1596 0.4054 MASVEIVDLSSDDESEKAVPIAVKLEPGYVTAAERERVSGDRRLVKCHSYSSVLEQGPSPIDDTGISYASSVCAAPLSRQFWKAGSYDDRQGSQMSVKDGNNYLHVHPMFLHSNATSHKWAFGALAELLDNAVDEIQNGATFVSVDKISNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKNSKLAIGQYGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTFLMQTQLDRIVVPMVNYEYNTSTSSLDVLNGKEHFMANLELLLRWSPYSSEADLLKQFQNMGSYGTKVIVYNLWFNDEGITELDFDTDPKDIRIAWDVKKISTIPTRKRIQEEHIAKTFRYSLRVYLSILYLRLPKTFQIILRGQAVKPHSIADDLKLVEFIKYTPQCAGPVEELFVTIGFLKEAPHVNIHGFNVYHKHRLILPFWQVVRYSDSRGRGVVGIMQADFVEPTHDKQDFERTSLFQKLEARLKSMTWEYWNIEKGKLEGTCDFLLIEQMKYKLKNYKSSLLSQKITSSGLVTSK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02014 531 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 121 326 IPR036890 -
Vifa2g02014 531 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 46 490 IPR045261 GO:0016887
Vifa2g02014 531 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 123 215 - -
Vifa2g02014 531 Pfam Morc6 ribosomal protein S5 domain 2-like 350 487 IPR041006 -
Vifa2g02014 531 FunFam MORC family CW-type zinc finger protein 4 107 308 - -
Vifa2g02014 531 Gene3D - 108 253 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02014 Vifa-Chr2 523505552 523519130 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02014 - - gmx:100795667 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02014 2 523505552 523519130 Vifa2g02014 2 523505552 523519130 ECH