Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02009 ATGACTTCAAGCATGTTGAATGGGGAACGAAGGTGGGCCTCTTCCACCAGAAGGGGTGGTATGACCGTGTTAGGCAAAGTCGCTGTTCCAAAACCTATAAATTTACCCAGTCAGAGGTTAGAAAATCATGGCCTGGACCCAGATGTGGAGATTGTACCCAAGGGTTCCCTCAGCTGGGGCTGTAAATCACCATCTTCTGCATTAAATGCATGGGGTTCTTCTCTATCTCCAAATACCAGTTGTGGTACTAGTTCACCCAGTCAACTGAGTGCCCGTCCATCATCTGGTGGAAGTGGAACCCGCCCTTCAACTTCTGGTAGTGATAGGGCTTCTGAACTAACTAATAGAGCATGTGGGTCAAACTCCCGGCCTTCATCATCATCTGGGGTACCGACATCAAGTCAGACTTCTCAGACATCATTGCGTCCTCGCAGTGCTGAAACAAGACCTGGTAGTTCAGAATTATCTCGATTTGCTGAACAAACGACTGAAAATTCAGTGGCTTGGAATGCTGCTAGAACTACAGAGAAATTGGGAATTAAACAATGCAAGAATGATAATTTTTCTTTGAGCTCTGGAGATTTTCCTACTCTTGGTTCTGAAAAGGACAAATCTGTACCTGATTTTGAGTCCCAAGATCACGGTTCTCATATTTGTTCCGACTCTTCTGCTGGACTTGGGAAAGAGAAAAATGAGACCTCAACTGTCGATGATCTTCCTGTTCATGCAAATACGAAGTGTGAAACTGAAAATTCTTGGAGAAGAGACGACCAGGCTTTCAATGAGGATGGTATGAGGCATGGAATAGAGAAATGGCAGGGGAATCTCCATCCCTATCCTAATGCTGGTGGCTTTCCAATTGAACCATTTCCATTTTACCGTCCACAATTTCCACATACTGGTTTTGCGAATCCACCTCAAGTTCCTCCTCCTGGAAGTGGTCCAAGAGGGCAGCATAATAATGGGGAAGTCTACAGGCCTCATATGCCTGATGCTTACATTCCTCCAGGTATGCCATTGAGACCTGGTTTTTTCCCCGGCCCTATGGCCTATGAAGCCTACTATGGCCCTCCAATGGGCTATTGTAATTCCAACGAACGAGATGTCCCTTTCATGGGAATGGCAACTGGAGCTTCTGTTTATAATAGGAACCTAAGTCATAACCCACCCGAGCATGGCATTTCACAAGGTAGATCTGGTGGACATGGTCCTGTAGTAAAACTATTGGCATCAGAGCAGGTAGAATCCAGTCATACTCCTGACACCAGGCCATACAGAGTTCTTCTTAAGCAACACAATGAGTTGGATGGAAAAAATGAACCAATGACAAACTGGGAGGACTCGTTAACAACGAATGCATCACATGCCAATGAGAGGGACCAATCAAGATTGCCTGTCCAGGAGAATGATCACAGAGGGAAAATGGAGATGGATTTAAAGAGGATAAGTGCTCATAGCAAAGAAGCTTCTTCTCAAACATTGGGAAATCAAGGATATATTTCTGTCAAGAATACCAAGTCCCTTGAAAGTGCTGGAAGCTTTGATAATATTTCGGAAAGGAAAATGGATGTTGTCAGTTCTAATAAACTAGGAATTGCCTCAAGACCGTCTGCCCCTAAAGATTCTACTCTGATTCAAAAGATAGAGGGTTTAAATGCAAAAGCCAGGGATATTTCATCCACTAAAAGTAAAGATGATAGGATGAATAAGTTTTACACTGGTAGCAAAGTGGATAATGAAACAAGTGCTGGTGTTGTATCTCTTGAGACAACCCTTGCCACTGAAGTAAAAAATCCAACAGTTTGTGGAGTGGGTGCTTTTGGAGGCGAAAAGAATTTGAAGTCATCAGCTTTCAGTGAAACACCTACATCCAGGCAAGTTTCTCATGGCATGCAAGGCAGACACAACCATCGTAAAAGTAGGCTCGATACTCAAGATGTTGATGGTTGGCAAAAGAAATTTGGGGTTATAGATTCTTCATCATCATCAGGTACGCAGTTGGAAGCATCTAGCATTCTTGTAGGTGAGCATCAAATATCTGTTGATGCCTATGAAAGGTCTGGGTCGTATAGCCAAGTAAGGCGCGAAGGAATATCTGTGCAAACCTTATCTGATTCAGCCAATAGCCATGAACAGCGTGCTATAACAAAAGAGTTATCCAAGCAGCAGACTAAGCAACTGCAGGTGGAGGAGGAGCGCACTAAAAAACAAAGGGCTAAATCTCTAGTCAAGTTAGAGGAGGTAAACAGGCGCACAGAAGCAGTGGAAGGATCAATGCAGAAAGCGTATGCTGCGAATTCTCCCCTACAGAATAGGCAAGAAGAATTTCAATTTTCTGAGTCCGCAACAGTATTGGGAAAATCCGGGAATGCCAATTCTTTTGTAATGCCTAATGATAATGATGCAAGTCAGAATGTTATGAATCCTAATCAGTCGGCGACCCTGTACCAGAATGTTAATTGCGCTGATGCCACAACATCTTTACAGTCTCAAAACAATGTTGCCTCAAAGCAGAGAAGAACAGGTTATAAACAAAAGCAAAATCTTTCTGACCCAATGGCTTATGTTAATGTATCTTCCGGCATTGCTACAAATGAAGTAAGTTCAGCCTTACCCATGAATTCAATTTCTATGGTTGAGTCACATGGGAACCAGAAAAAGAAGAATAACAGGAATAAAAAACACAAACAGAAAGTTAAAGATATTTCATTCTTGCCTGCATTACCAACTGCAACGTTGAAGGAAGCCGATCTTTCTAGTAGCTCTGTTGATAATAAACCCAGGGAAGACATCGAGTTAGATCAGGGATCACTTCAGTCATCATCTTTGTATAAAGATCCAAACCAGTATTCAGAGCAAAAATATTCAGAAATTGAAGAATCCTATGGTAGAACGAATAACCTGTTGAAATCACAGCACTCTCGTAGGATGCCAAGAAACATGCAGGCTAATAGACTAACAGAGAAGTCCCATGGGAGTGATGCTTTGATGTGGGCACCTGTTAAGCCACCGAACATGGGCATCTTGGATGAATCAAGTGAGAAAAGTAAAATTGAGGCAATTGTTCCTGCAAAGAGTGAACAGCAGGTGCATAATTTAAGAAATAAGAGGGCTGAAATGGAGAGATATATTCCAAAACCTATTGCAAAAGAAATGGCTCAGCAAGAAAGTTCACAACAAATGGGATCCTCAATCAGTCAGGTTCCTACAGATAAATGTGTTGAAAGAGTTGATTCTGGTTCTGAAGGTCCCCAGATAACGCAGAATACTATTTCAGGTGCTGGAATAGTGAGTTCTGTCCTGGAGTCTAAAATTGGAGATAGCAGGCAGACTAGGGTTTGGAAGGGAAAATCACATGGATCATGGCGGCAAAGGAATTCAACAGAATCAAAAGATGTGCACGACATGCTAGATGGAGTGAACCATGGTTCAAAATCCTATCAAAATATTCAGATATCGATGGAACATCAGAAAGTGCAGATGTCTGAAACAAGAGGACAATGGAATCATGCTAATGACACCAGCAAACCTGATGTCTCAAACAATCCAGAGAATTATGATTCAGCTGTTTCAGGGAAAGGAACGGTCAGGGAAAGGCAACTTTTTAGGCGACAGAAGGGCACATGGGTGAACCATGACGTTGATCAGAAGAGAAGGGCTGGGGAGATAAGGAAAACTGAAACACTGATATCATCTTCTGTGCATAATCAACCAGATATGAATGCTGTTTTGAAGGAAAATCGAAGTATTGGAGAACGTGGGTCGTCACACTGGCAACCCAAATTTCAGGCATCAAATAATCAGAGAGGAGATAAACCCAAGAAAAAGGAGTTTACTCATGGTGGATCATTTCCAGGTGCTATAGACAAGGATTCTAGCTTTCTTGCAGCACAACCTCCCAGCCAATCAGTTTCTGAGAAGAGCAAGGGTAGAGAAGCTCCAACTTTTGGGAATCTGGAGGTTAAAAGAGATAGTAGAAACGCTCCACTAGAAGGCCATCCCCACTCCGTAAATCAGGGAGCTGTTAGCTCAAGTGAGCAGGCTCCAACAAGTATGAATTCTAGGAATCAGCATCGCCCATCATCCGGGGTTCGCCGAAGTGGAAATCAAAGCCATTTTGGGAAGGGACGTGAGTTTCATGAAGATTGGAATATACATGCACAAGATAACCAATATCATCAAAACCGGGAAAAACAAGGCCCTCCTTCAAACTTTCACCACCAGTACCACTCTTTAGGACCATATGGAGACAGCAAATCAGACAACTCTGAACGACCTAAAGATGGTTACTATCAGGCCGGGGGAAGATTTAGGGAGAGGGGTCAAACTCACTCAAGACGAGGTGGTGGAAACTAG 4356 0.4295 MTSSMLNGERRWASSTRRGGMTVLGKVAVPKPINLPSQRLENHGLDPDVEIVPKGSLSWGCKSPSSALNAWGSSLSPNTSCGTSSPSQLSARPSSGGSGTRPSTSGSDRASELTNRACGSNSRPSSSSGVPTSSQTSQTSLRPRSAETRPGSSELSRFAEQTTENSVAWNAARTTEKLGIKQCKNDNFSLSSGDFPTLGSEKDKSVPDFESQDHGSHICSDSSAGLGKEKNETSTVDDLPVHANTKCETENSWRRDDQAFNEDGMRHGIEKWQGNLHPYPNAGGFPIEPFPFYRPQFPHTGFANPPQVPPPGSGPRGQHNNGEVYRPHMPDAYIPPGMPLRPGFFPGPMAYEAYYGPPMGYCNSNERDVPFMGMATGASVYNRNLSHNPPEHGISQGRSGGHGPVVKLLASEQVESSHTPDTRPYRVLLKQHNELDGKNEPMTNWEDSLTTNASHANERDQSRLPVQENDHRGKMEMDLKRISAHSKEASSQTLGNQGYISVKNTKSLESAGSFDNISERKMDVVSSNKLGIASRPSAPKDSTLIQKIEGLNAKARDISSTKSKDDRMNKFYTGSKVDNETSAGVVSLETTLATEVKNPTVCGVGAFGGEKNLKSSAFSETPTSRQVSHGMQGRHNHRKSRLDTQDVDGWQKKFGVIDSSSSSGTQLEASSILVGEHQISVDAYERSGSYSQVRREGISVQTLSDSANSHEQRAITKELSKQQTKQLQVEEERTKKQRAKSLVKLEEVNRRTEAVEGSMQKAYAANSPLQNRQEEFQFSESATVLGKSGNANSFVMPNDNDASQNVMNPNQSATLYQNVNCADATTSLQSQNNVASKQRRTGYKQKQNLSDPMAYVNVSSGIATNEVSSALPMNSISMVESHGNQKKKNNRNKKHKQKVKDISFLPALPTATLKEADLSSSSVDNKPREDIELDQGSLQSSSLYKDPNQYSEQKYSEIEESYGRTNNLLKSQHSRRMPRNMQANRLTEKSHGSDALMWAPVKPPNMGILDESSEKSKIEAIVPAKSEQQVHNLRNKRAEMERYIPKPIAKEMAQQESSQQMGSSISQVPTDKCVERVDSGSEGPQITQNTISGAGIVSSVLESKIGDSRQTRVWKGKSHGSWRQRNSTESKDVHDMLDGVNHGSKSYQNIQISMEHQKVQMSETRGQWNHANDTSKPDVSNNPENYDSAVSGKGTVRERQLFRRQKGTWVNHDVDQKRRAGEIRKTETLISSSVHNQPDMNAVLKENRSIGERGSSHWQPKFQASNNQRGDKPKKKEFTHGGSFPGAIDKDSSFLAAQPPSQSVSEKSKGREAPTFGNLEVKRDSRNAPLEGHPHSVNQGAVSSSEQAPTSMNSRNQHRPSSGVRRSGNQSHFGKGREFHEDWNIHAQDNQYHQNREKQGPPSNFHHQYHSLGPYGDSKSDNSERPKDGYYQAGGRFRERGQTHSRRGGGN 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1157 1204 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1157 1189 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 297 322 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 934 953 - -
Vifa2g02009 1451 Pfam BAT2 N-terminus 15 140 IPR009738 -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1316 1330 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 916 953 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 615 643 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1420 1445 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 201 215 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1337 1369 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1295 1309 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 185 233 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1122 1139 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1 164 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1250 1451 - -
Vifa2g02009 1451 PANTHER PROTEIN MODIFIER OF SNC1 1 283 1451 IPR038808 -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 59 164 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1371 1393 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1253 1267 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 615 630 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 1108 1143 - -
Vifa2g02009 1451 MobiDBLite consensus disorder prediction 879 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02009 Vifa-Chr2 522454625 522467136 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02009 - - cam:101488646 1891.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02009 2 522454625 522467136 Vifa2g02009 2 522454625 522467136 ECH