Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02006 ATGTTGAGTAAGATCACAAAATTCAAACCACTATTCTTTCTTTCTCTCTCAATCACTCACACTCTTTTCTTGGTAATTGTTCTGTTTAAAATTAGAATAGACATGAATGAATACTCAGTTTCCTGCAAAAGACATAGCAAACACCACACTAAAAGACAACACCATGTTGTCTCTAAACAACCATCTGCACAAAACCATTCTCTCATATTGTCCACTTCCCAAAACATTCCACCTATGCTATCTTCCTTTGTTTCTTTGCTACTTCTTCTTACTTCAATTACACCTTCACTTTCTCATTCTACTCACCACTCAAAGACTAACCAAACATTCAAACCAGGTCAAGAGTTTCTCAAGTTAAGCAGAATCAGAACTCACCTCAAGAAAATCAATAAGCCTCCTGTCAAGACAATTCAGAGTCCAGATGGTGATTTGATAGACTGTGTTTTAACTCATCAACAACCAGCTTTTGATCATCCTAAGCTTAAAGGGCATACACCATTGAATCCACCAGAAAGGCCAAAGGGATACAACAACAATGGAGAAAATGTTAGTGAGAGATTTCAGCTATGGGCTGATTCCGGTGAAGCGTGTCCCGAAGGAACGATTCCAATCAGAAGAACAACAGAAGAGGATATTCTTAGAGCAAGCTCTATCCAAAGATTTGGAAGAAAACCAAAACCTGTAAAGAAAGACTCAACTAGTAGTGATCATGAGCATGCAATTCTGTTTGTAAATGGAAATCAATACTTTGGAGCAAAGGCAAACATAAATGTGTGGACACCACAAGTAACAAGTGAATATGAATTTAGTTTGTCACAAATATGGGTTATTGCTGGCTCTTTTGGTAATGATCTGAATACCATAGAAGCTGGTTGGCAGGTAAGTCCAGAACTGTATGGAGACAAATATCCAAGGTTCTTCACTTATTGGACTACAGATGCATATCAAACAACTGGATGCTACAACTTACTATGTTCAGGTTTTATCCAAACAAACAACAAGATAGCAATAGGGGCAGCAATCTCTCCCATTTCAGCTTATAACAGTAGACAATTTGATATTGGCATAATGATTTGGAAGGATCCAAAGCATGGACACTGGTGGTTAGAGTATGGTTCAGGACTTTTAGTTGGATATTGGCCAGCAACCGTGTTTAGCCACTTGAGGAATCATGCAAGCATGGTACAATTTGGTGGAGAGATTGTGAACACACGTTCTAAGGGTTACCACACTGGCACTCAAATGGGGAGTGGACACTTTGCAGAAGAAGGGTTTAAAAAAGCTGCTTATTTTAGAAACTTAGAAGTGATTGATTGGGATAATAACTTGCTTCCTCTTGCTAATATTCATCAATTGGCTGATCATTCAAGTTGTTATGATATTAGGCAGGGTAATAGCAATGCTTGGGGGACTTATTTTTATTATGGAGGTCCTGGAAGGAATGTAAAATGCCCATGA 1458 0.3834 MLSKITKFKPLFFLSLSITHTLFLVIVLFKIRIDMNEYSVSCKRHSKHHTKRQHHVVSKQPSAQNHSLILSTSQNIPPMLSSFVSLLLLLTSITPSLSHSTHHSKTNQTFKPGQEFLKLSRIRTHLKKINKPPVKTIQSPDGDLIDCVLTHQQPAFDHPKLKGHTPLNPPERPKGYNNNGENVSERFQLWADSGEACPEGTIPIRRTTEEDILRASSIQRFGRKPKPVKKDSTSSDHEHAILFVNGNQYFGAKANINVWTPQVTSEYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDKYPRFFTYWTTDAYQTTGCYNLLCSGFIQTNNKIAIGAAISPISAYNSRQFDIGIMIWKDPKHGHWWLEYGSGLLVGYWPATVFSHLRNHASMVQFGGEIVNTRSKGYHTGTQMGSGHFAEEGFKKAAYFRNLEVIDWDNNLLPLANIHQLADHSSCYDIRQGNSNAWGTYFYYGGPGRNVKCP 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02006 485 Pfam Neprosin activation peptide 136 241 IPR025521 -
Vifa2g02006 485 Gene3D - 258 371 - -
Vifa2g02006 485 FunFam Putative carboxyl-terminal proteinase 258 377 - -
Vifa2g02006 485 Pfam Neprosin 267 478 IPR004314 -
Vifa2g02006 485 MobiDBLite consensus disorder prediction 156 179 - -
Vifa2g02006 485 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 120 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02006 Vifa-Chr2 521137471 521140228 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02006 - - mtr:11436542 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02006 2 521137471 521140228 Vifa2g02006 2 521137471 521140228 ECH
Vifa2g02006 2 521137471 521140228 Vifa2g02006 2 521137471 521140228 PCT