Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01995 ATGGACCCAGAACCCCAAAATTCGGAAAATAGCGATTCTGTCTTTGTTTGGGACGAAAAATCGCAGCTTTACTTCCACGCCAGTAGTGGATTTTATCATGACCCTAATGCTGGTTGGTACTATAACACCACTGATGGTGTTTATTACAAATTTGAGGATGGGAATTATGTACCTTTAGATTCCAATAAGGATAATTGTGAAGAAACCTATGTGTGCATGGAAACCAAACCCGAAAGCCCTAAGCAAATACATGACATTAACAATGAGGATTGTTACACTTCCTTTCGCGGAAACGAATTTGAAACTAACCAACAGACTGGGACCTTGGCCGAGGAAGCAGCGGTTGTTCTGTCAACAATGTTACAGTATGTAGATGTCTTTGTGATAGATGCCCCGAACTCTACGAACAGTCCAACTTGTGGAAACCCTCCACCACCATCGGAATGGTTGGAGGATACGCTTATTGATCTTTACTTATCTGGCTACAACAACATAGCACTCAGTGCAGCTGATACAGTGACAGTGCCCGTGGAAACCGATGGATATAACTCCACATTAGAAGCTAATGCTTACAGCAACACTTACGAAGTGGAAGGTGACTGGAACACAGGCCTAGAGGATGAAAACGGCATGGCTGATGATAAAAGAATTGTAGATGAAGTCGTAGCTTACAGTGATACGTATGAACTTGAAGAAGGTGAGTGGATCCCAGATCCAGAGGATGAAAATCACATAGCTGATACAAGTACCATAGATGAAGGCATGTTGTTGGATGAAGAAAAATGGAGAGCTCAGTATGGTCAAGTCATTGAATCAAGGAAAGATTTGGTATTAGAGTTTCCAGTTGTGGACTTGTGGGATTGGGAAATGATTAGAACTTCCAAAAAAGATGGAAAGGATAGGACGGCAAAGTTGGTCGGAAAACTGGTTAAACAATCTGCAAAGCGACACCCATCTATCTCATCTAGTGAAAAGAAATTTAAATCTGCTCCTATCTGTGAAGTGCATCTCGATCTGGTACGCGTCAAAACAGGGCAAGTATATAGATTGCGAAATCCTAGTGCAAGATATGTGACTTCATTATCAAGTTATGATTCTTCCAATCCAACAAAAGATTGGGACTTTCCTCAGCTATCATCTAATACAAATAGCGCGCGTGTCTCTAAGTCCGGTGAAAGTACTCCATCCACTTCAAATGAAATTTCTACAGAGAAGGAATTGCCAAGTCAACTTTCTGCATCCAAGCAAATAAAAAGTCAATACAGAGATCGTGCGGCAGAAAGAAGAATCTTGCATGGTGGCTTTGGTGTGGGTCCAGGACAGAAGAATATTTGTGGCGGTTATGATACGCCACCATCACCTGATGCTAGTCCACAAGAAGCTAAAGAAGAGGCCTTGAAGATGTCATTTGGGCCGGGAAGTTATGCCAGGAAGCTTCTAGAAGGCATGGGCTGGAAGGAGGGAGAAGGGCTTGGCAACTCAACAAAGGGCATGGTGGAACCTATTCAACCAGTTGGAAACACTGGTAGTGCAGGCTTGGGATGGCCTCGTCGAAATTAA 1560 0.4295 MDPEPQNSENSDSVFVWDEKSQLYFHASSGFYHDPNAGWYYNTTDGVYYKFEDGNYVPLDSNKDNCEETYVCMETKPESPKQIHDINNEDCYTSFRGNEFETNQQTGTLAEEAAVVLSTMLQYVDVFVIDAPNSTNSPTCGNPPPPSEWLEDTLIDLYLSGYNNIALSAADTVTVPVETDGYNSTLEANAYSNTYEVEGDWNTGLEDENGMADDKRIVDEVVAYSDTYELEEGEWIPDPEDENHIADTSTIDEGMLLDEEKWRAQYGQVIESRKDLVLEFPVVDLWDWEMIRTSKKDGKDRTAKLVGKLVKQSAKRHPSISSSEKKFKSAPICEVHLDLVRVKTGQVYRLRNPSARYVTSLSSYDSSNPTKDWDFPQLSSNTNSARVSKSGESTPSTSNEISTEKELPSQLSASKQIKSQYRDRAAERRILHGGFGVGPGQKNICGGYDTPPSPDASPQEAKEEALKMSFGPGSYARKLLEGMGWKEGEGLGNSTKGMVEPIQPVGNTGSAGLGWPRRN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01995 519 MobiDBLite consensus disorder prediction 360 420 - -
Vifa2g01995 519 MobiDBLite consensus disorder prediction 360 419 - -
Vifa2g01995 519 PANTHER RNA-BINDING PROTEIN 4 517 - -
Vifa2g01995 519 CDD OCRE 15 58 - -
Vifa2g01995 519 Pfam OCRE domain 13 58 IPR041591 -
Vifa2g01995 519 SMART G-patch_5 470 516 IPR000467 GO:0003676
Vifa2g01995 519 Pfam G-patch domain 474 514 IPR000467 GO:0003676
Vifa2g01995 519 ProSiteProfiles G-patch domain profile. 472 518 IPR000467 GO:0003676
Vifa2g01995 519 MobiDBLite consensus disorder prediction 487 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01995 Vifa-Chr2 519440115 519442960 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01995 - - psat:127083673 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01995 2 519440115 519442960 Vifa2g01995 2 519440115 519442960 ECH