Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01992 ATGGCCAAGATTCCCAACACAGTATTATTCTCTTGGAAACACTTGTTAGTGCTATCACTCGCTTTGAATGTGAGCTTGATACTACGAATGCTCTATGAAGGTGAAGAAAGACACAACAACATCTCTTGTCACAAAAACGGAACAGATTTTGACACAAAACCACATAGTAGTATCATCAAATCACGTCTTGTTATGGCCTCATCCACTTCCTCTTTGGCAAACACTACATGCACAGACCTTAAAGCACGCAGCAACAGAATTATCAATCTCGATCATGGCAATCCGACAGTGTATGAGAAATTTTGGAGACAAACTGGTGACAAGACAAATATAATAATTAGAGGATGGCAATCCATGAGCTATTTTGCGGATGTGTCCAACATATGCTGGTTTCTTGTACCAGAGTTTGCAAAGGAGGTAATGAGGTTGCACAGATTGGTCGGGAATGCAGTAACTGAAGGACGTTACATTGTTGTAGGGACAGGTTCTTCTCAACTGTTTCTTGCTGCACTATATGCTCTTTCCCCTTCTCATGCAAATGAACCAATCAACGTTGTCTGTGCCGCACCCTACTACTCTTCATACCCAACAATGACGGATTATCTGAAATCCGGGCTATACAAATGGGGAGGTGATGCAAATAGTTATGAGAAAGATGGTCCCTACATTGAACTGATAACTTCACCGAATAATCCTGATGGACATGTGAGGACCTCTAAGGTTAACCGTAGTCAGGGACTTCTGGTTCACGACCTTGCATATTACTGGCCGCAATACACTCCTATATCATTTCCTGCAGATAATGAGCTAACCCTTTTTACTCTCTCAAAAATCACCGGTCATGCAGGATCGCGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCAAAGAAAATGACCAAGTTCATAGAGTTGAACTCAATCGGAGTCTCAAAGGATTCACAGCTTAGGGCTGCTAAGGTTTTAAGCGCGGTTTCCGATAGTTGTGAACAAGAAAACTCTCAAGAGGGTGAATCATTCTTCGAGTTCAGCCATAAGCTCATGACAAAGAGGTGGAAGCAGCTGAGAGAAGTAGTGAACCGTGGTGAATTGTTCAGTTTGCCTCAATTTTCTCCTTCTTTCTGTAACTTTTTCAATCAGGTGTTGGAACCTCAACCAGCATTTGTGTGGTTGAAGTGTGAGGGAAATGTGGAAGACTGTGGAAGCTTTCTTAGAGAACACAAGATCTTAACCAGAAGTGGAAAACAGTTTGGTGTTAGCACAAAATACGTCAGAATTAGCTTGTTGGATACTGATGAAAGTTTTACCCAATTTCTAGATAGACTATCTAGCATAAAGTCTATGTAA 1350 0.417 MAKIPNTVLFSWKHLLVLSLALNVSLILRMLYEGEERHNNISCHKNGTDFDTKPHSSIIKSRLVMASSTSSLANTTCTDLKARSNRIINLDHGNPTVYEKFWRQTGDKTNIIIRGWQSMSYFADVSNICWFLVPEFAKEVMRLHRLVGNAVTEGRYIVVGTGSSQLFLAALYALSPSHANEPINVVCAAPYYSSYPTMTDYLKSGLYKWGGDANSYEKDGPYIELITSPNNPDGHVRTSKVNRSQGLLVHDLAYYWPQYTPISFPADNELTLFTLSKITGHAGSRIGWALVKDKEVAKKMTKFIELNSIGVSKDSQLRAAKVLSAVSDSCEQENSQEGESFFEFSHKLMTKRWKQLREVVNRGELFSLPQFSPSFCNFFNQVLEPQPAFVWLKCEGNVEDCGSFLREHKILTRSGKQFGVSTKYVRISLLDTDESFTQFLDRLSSIKSM 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01992 449 Gene3D Aspartate Aminotransferase, domain 1 339 447 IPR015422 GO:0003824
Vifa2g01992 449 Gene3D - 133 336 IPR015421 GO:0003824
Vifa2g01992 449 CDD AAT_like 134 443 - -
Vifa2g01992 449 Pfam Allinase 88 446 IPR006948 GO:0016846
Vifa2g01992 449 SUPERFAMILY PLP-dependent transferases 81 445 IPR015424 -
Vifa2g01992 449 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 62 445 - -
Vifa2g01992 449 Gene3D - 30 128 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01992 Vifa-Chr2 518606447 518614369 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01992 K16903 - gmx:100807013 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01992 2 518606447 518614369 Vifa2g01992 2 518606447 518614369 ECH
Vifa2g01992 2 518606447 518614369 Vifa2g01992 2 518606447 518614369 PCT