Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01962 ATGCAAGACTCAATTGGAATTCCTGCATGTTTTTCTTCAACAAGTCATGACGATCATCAATATCATCAAGGAGCTGTGACACGTTCAGTATCAGTGGAAAACCCCGAAAAGGAAACTCAATATAGCTGCAAGGTTGAGCTAAAACCATGGTACTTTTGGAGGAAACAAGGTTCGAAACGGTTCGCAGTAGATGGAAAAGAAGTTGATGTTTTCTGGGACCTTAAATCTGCAAAATTCAACGGTGAAACCGAACCAACTTCAGAATACTACGTAGCAGTTGTTTGTGATGAAGAAGTTGTGTTGCTTGTTGGTGATTTAAAGAAAGAAGCTTATAAGAAAACCGGGTGTAGACCATCACTCATTGACCCGATTCTTGTTTCGAAAAAGGAACATATATTTGGAAAGAGAAAATTCTCAACTAAAGCTAAGTTTCATGAGAAAGATAGGTGTCATGAGATTTGTATAAAGTGTAAGAACAAAGGTAATATGAACGTTGTTGGAGATGAAGATAAAGTTAAAGTTGAACCAGAGATGGAGATAAGATTTGACGGGGAGTTGATGATTCATGTGAAGCATTTGCAATGGAAATTCAGAGGGAATGAATCGGTTTATCTAAACAAAACAAGAGTTGAGAGAAGTAGCAATAGTACTTGTGAGTCATTGGAGGGTCATAGTGGCAGTGATTCATCATCATCAGAGTTTTGTTTGTTTCTATATGCTTGGAAGGTTGAATGA 735 0.3755 MQDSIGIPACFSSTSHDDHQYHQGAVTRSVSVENPEKETQYSCKVELKPWYFWRKQGSKRFAVDGKEVDVFWDLKSAKFNGETEPTSEYYVAVVCDEEVVLLVGDLKKEAYKKTGCRPSLIDPILVSKKEHIFGKRKFSTKAKFHEKDRCHEICIKCKNKGNMNVVGDEDKVKVEPEMEIRFDGELMIHVKHLQWKFRGNESVYLNKTRVERSSNSTCESLEGHSGSDSSSSEFCLFLYAWKVE 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01962 244 PANTHER EXPRESSED PROTEIN 28 211 IPR008586 -
Vifa2g01962 244 Pfam Plant protein of unknown function (DUF868) 29 211 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01962 Vifa-Chr2 505675201 505676196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01962 21 244 EF-hand Containing Proteins AT5G28150 37.849 2.69e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01962 - - gmx:100779755 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01962 2 505675201 505676196 Vifa2g01962 2 505675201 505676196 ECH
Vifa2g01962 2 505675201 505676196 Vifa2g01962 2 505675201 505676196 PCT