Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01961 ATGATGCACTTGGCCCCAAGTAGGCTGTTATGCAGTAAAAGGAAATCACTTTCTGTAGGTGCTCATAGAGAGAGAGACGCCATGGTGCCTGCTGCCAGGGTTGCTACTGCACAGCCTCTTTTTTCATTTGGATTGATTTCTGACGTCCAATATGCTGACATTCCTGATGGTCGCTCATTCCTTGGTGTCCCACGGTATTATAGGCATAGTATTCTTATTTTGCAGAGAGCAGTTAAAGAATGGAATACTCATCAGAAGCATAAGTTTGTGATTAATTTAGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTTTTAATGCTGTAAAGAAAGTTGTGGATGAATTTGAAATGTTCAAGGGACCTGTGTATCATATGATTGGAAATCACTGTCTGTACAATCTTCCTCGAAGCAAGTTACTTCCCTTATTAAAGATCCAAACCCTTGATGGTTGTGCTTACTATGATTTCTCACCAGTGCCGGAATATAGATTTGTAGTTCTGGATAGCTATGACATCAGTGCCATTGGGTGGCCTCGAGATCACCCAAAAACACTGGAGGCCTTGAAATTGCTAAGAGAGAAGAATCCAAATGAAGATAAGAACAGTCCAACAAATTTGGAGGGGCTTGACAGAAGGTTTCTTATGTTTAATGGAGGCATCGGAAAGGAACAGATGGAATGGTTAGATGGTGTTCTCCAGAATGCAACCGAATTGAAACAGAAGGTGGTTGTCTCTTCCCATCTGCCTCTAGATCCCTGTGCTACATCCAAGGAGGCGCTGTTGTGGAATTGTGATGAAGTGATGAATTTAATACACAGATACAAATGTGTTAAGGTCATTCTTGCTGGGCATGATCATAAAGGTGGGTACTCCATTGATTCTCACGGGGTACACCATAGAGTTTTTGAAGCTGCACTTGAATGTCCTCCTGGCTCAGATGCATTTGGAAGCGTTTATGTCTATGATGACAGGATATCACTTGTAGGAACTGACAGAATGGCAAGTACAGACATGCATTTTAATCCTCAATAA 1038 0.4162 MMHLAPSRLLCSKRKSLSVGAHRERDAMVPAARVATAQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILILQRAVKEWNTHQKHKFVINLGDIVDGFCPKDQSFNAVKKVVDEFEMFKGPVYHMIGNHCLYNLPRSKLLPLLKIQTLDGCAYYDFSPVPEYRFVVLDSYDISAIGWPRDHPKTLEALKLLREKNPNEDKNSPTNLEGLDRRFLMFNGGIGKEQMEWLDGVLQNATELKQKVVVSSHLPLDPCATSKEALLWNCDEVMNLIHRYKCVKVILAGHDHKGGYSIDSHGVHHRVFEAALECPPGSDAFGSVYVYDDRISLVGTDRMASTDMHFNPQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01961 345 CDD MPP_Nbla03831 41 329 IPR041869 -
Vifa2g01961 345 Gene3D - 36 335 IPR029052 -
Vifa2g01961 345 SUPERFAMILY Metallo-dependent phosphatases 39 341 IPR029052 -
Vifa2g01961 345 Pfam Calcineurin-like phosphoesterase 42 289 IPR004843 GO:0016787
Vifa2g01961 345 PANTHER - 33 343 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01961 K01517 - gmx:100792911 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01961 2 505436472 505437724 Vifa2g01961 2 505436472 505437724 ECH
Vifa2g01961 2 505436472 505437724 Vifa2g01961 2 505436472 505437724 PCT