Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01951 ATGTTGGTAATGAAAAACATGTTTATGTCTTACACTAAAATCATGATCATTATTATCCTATTCTTCTTGGTTTGTGTTGGATTATGCAATGGTGCCATTCCTAAAACACCTTTGCAAGGTAGAAAAGGACAGTGGCAACTGCTTCTCAACAACACCGGAGTTGTTGGTATGCATATGGCATTAACCTACAAAAACACTGTCATAATGTTTGATCAAACTGGAGGAGGCCAATCTAGATACAAACTTCGGAAACGATTCAACGGAACAACGTGTAGAACAAACAACAACAACGATATAACCGATTCAACATGCTATGCTCATTCAGTTGAGTATGATATCAATGCCAATAGAATAAGACCCTTGAGGCTTGAAACTGACCCTTGGTGTTCCTCAGGTTCTTTCCTAAGCAATGGAACACTCTTACAAACAGGAGGCTATCATGAAGGTGCTAAGAGGGTTAGATTCTATAGGCCTTGTGGGAATAATCAACATTGTGATTGGATACAATCAAAGAAAACTCTATCTGATGAAAGGTGGTATGCTTCTAGTCAGATTCTACCAGAACATAATAGAGTTGTTCTTGTTGGTGGAAGAAGAGTTTTCACTTACGAATTTGTCCCGAAAAGTACTTCTAATGAAAAATCTTTCGAACTTCCGTTTCTGCATGAAACCAATGACAGAAACTCAGATGGAAACAATTTATATCCCTTCACTCACCTTTCATCCGACGGAAACTTGTTCGTTTTCGCCAACCGCGATTCCATTTTACTCAACTTGAGACGTAACCGAGTAATCAAGACATTCCCTCGGATTCCAGGAAACGGTTCGAGAAACTACCCGAGTTCAGGATCATCCGTGTTACTCCCATTAGACCATAAAGACAGGTTTCAGAAAGTTGAAGTTATGATATGTGGAGGTTCATCAACGGGAGCACTCAATGCTGCTAAAAGCAAAAGGTTCATTTCAGGTTTAAGATCATGTGGGAGAATGGTGATCACAGGAAACAAACACACATGGGAAATGGAGTACATGCCGAAACCGCGTCTCTTACACGACATGTTGATTCTACCAACAGGTAACATCTTGATTATAAATGGTGCTAAACATGGTTGTGCAGGATATGACAATGCTAGAAACGCTTCGCTCGAGCCTTATCTTTATAGTCCAAAGAAAAAACTAGGAAAAAGGTTCAGTGTCCTTCAGAAAACAATGATAGCAAGAATGTATCATTCATCAGCAACTCTTCTACCTGATGGAAGAATATTAGTTGCTGGTGGTAACCCACATGGAAGATACACTTTTCAGAATGTAGCATACCCAACAGAACTTAGACTTCAAGCATTTGTTCCACATTACATGGAAAAGAGGTATCATACTTGGAGGCCAAGTAACCTGACCATAGAAAACCATGCAGTTGGGTATGGTAAAGAGTTTAATGTGAGTTTTTTGTTGGGGAGGAGGCCAAGTGATGAGGTGAGGTTCAGTGTTTATTCGCCACCGTTTACTACTCACGCGTTTGCGATGAATCAAAGGATGTTGAATCTGAGGTGCAGGAGAATGGTGAGAAGTAGAGAGGGAAGGGTGAACGCAGTGTTGGAAGCTCCACCCACATCTGTTGTTGCACCTTCTGGTTATTACTTGCTTACGGTTGTGAATGGAGGAATTCCAAGCATGTCTCAGTGGATTCAGTTCACACACGCTTAG 1704 0.4079 MLVMKNMFMSYTKIMIIIILFFLVCVGLCNGAIPKTPLQGRKGQWQLLLNNTGVVGMHMALTYKNTVIMFDQTGGGQSRYKLRKRFNGTTCRTNNNNDITDSTCYAHSVEYDINANRIRPLRLETDPWCSSGSFLSNGTLLQTGGYHEGAKRVRFYRPCGNNQHCDWIQSKKTLSDERWYASSQILPEHNRVVLVGGRRVFTYEFVPKSTSNEKSFELPFLHETNDRNSDGNNLYPFTHLSSDGNLFVFANRDSILLNLRRNRVIKTFPRIPGNGSRNYPSSGSSVLLPLDHKDRFQKVEVMICGGSSTGALNAAKSKRFISGLRSCGRMVITGNKHTWEMEYMPKPRLLHDMLILPTGNILIINGAKHGCAGYDNARNASLEPYLYSPKKKLGKRFSVLQKTMIARMYHSSATLLPDGRILVAGGNPHGRYTFQNVAYPTELRLQAFVPHYMEKRYHTWRPSNLTIENHAVGYGKEFNVSFLLGRRPSDEVRFSVYSPPFTTHAFAMNQRMLNLRCRRMVRSREGRVNAVLEAPPTSVVAPSGYYLLTVVNGGIPSMSQWIQFTHA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01951 567 CDD E_set_GO_C 461 563 IPR015202 -
Vifa2g01951 567 Pfam Galactose oxidase-like, Early set domain 461 563 IPR015202 -
Vifa2g01951 567 Pfam Glyoxal oxidase N-terminus 57 306 IPR009880 -
Vifa2g01951 567 SUPERFAMILY Galactose oxidase, central domain 109 454 IPR011043 -
Vifa2g01951 567 SUPERFAMILY E set domains 457 563 IPR014756 -
Vifa2g01951 567 Gene3D Immunoglobulins 460 567 IPR013783 -
Vifa2g01951 567 Gene3D - 39 458 IPR037293 -
Vifa2g01951 567 PANTHER SECRETED PROTEIN-RELATED 24 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01951 Vifa-Chr2 504375711 504377414 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01951 - - gmx:100814200 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01951 2 504375711 504377414 Vifa2g01951 2 504375711 504377414 ECH