Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01950 ATGACGAATACGGTTGTGCCAACCGTAAAGAACCAGTGTCTTACGGTGAAAGACCGCGTGATTTTGACACGCGTCCCCGAAAACATTGTGGTTTCTCCACTTTCCGCAGGATCCGCTTTTTTAGGCGCAACTTCCCCAATTCCAAGCTCCTGTCATCTCTTCACTCTCGGCACTCTCCTGGGATTTAGGTTATTATCTTTATTCAGAGTCAAAATATGGTGGATGATACCACGTGTAGGACGATCCGCGAGTGATGTTCCAATGGAAACTCAGTTGCTGCTAGTAGAAGCAAGAGAAGAAACTGCTTTTAAGCCAGAGTTTTCTTCTGATTCTCAAGAGCTAGAAGAAGACAACATTTCCTACATTCTCTTCTTGCCTGTGTTGGATGGAGCATTTCGTGCAACTTTGCAAGGAACTGCATTTAACGAGCTTCAATTCTGCGTTGAAAGTGGAGATGCCTGTGTTCAAACTTCTCAATCACTTGAGGCAGTGTTTGTAAATTCAGGTGACAATCCATTTGAGCTAATCAAGGATTCTATCAAGATATTAGAGAAACACAAAGGAACTTTCTGTCATCTTGAAAACAAGGAGATTCCTGTACATCTTGATTGGTTTGGTTGGTGCACTTGGGATGCATTTTACACTCAAGTAAATCCACAAGGAATAAAAGACGGGATTCAAAGTCTCTCAAGTGGAGGTTTTACGCCAAAGTTTGTCATTGTTGATGATGGGTGGCAAGAGGGGCTCAACGAGTTTCACAAAGAAGGCGAACCAATAGTTGAAGGAACTCAGTTTGCAACAAGACTGATAGGCATTAAGGAAAATAAAAAGTTCAGCAATGCTGGTTCCAACAATTCTTGCAACAATCTCCATGATTTTGTTCACTTTATCAAACAGAATTTGAGTGTAAAATATATTTACATGTGGCATGCTTTAGCTGGTTATTGGGGAGGAGTACTCCCGTCTTCAGATGCGATGAAAAAGTATAATCCGAAGCTTACATATCCAATTCAGTCACCTGGTAACACAGGGAACCTAAGAGATATAGCCATGGACAGCTTGGAAAAATATGGAGTTGGAATCATAGATCCATCAAAATTATATGAATTTTACAATGACTTTCACAAATATCTTGCTAGCTGCGGCGTCGATGGAGTCAAGGTAGATGTCCAAAATTTGATAGAAACTTTGGGTTCAGGGTATGGTGGACGTGTCTCATTAACCAAACAGTATCAAGAAGCATTAGAGACATCAATTTCAAGGAACTTTAAGCGCAATAACCTCATTTGCTGCATGTGTCACAATTCTGATTCAATTTACAGTTCAAAGAAGAGTGCAGTAGCAAGAGCATCCGAGGATTTCATGCCAAGGGAACCAACGTTTCAGACGTTACACATTGCTTCAGTAGCTTTTAACAGTCTTCTTCTAGGGGAGATTTTTGTGCCAGATTGGGACATGTTCCATAGCAAGCACGAGACAGCTGAGTTTCATGCTGCAGCAAGAGCAATAGGTGGTTGTGCAGTATATGTTAGTGATAAGCCTGGAAATCATGATTTTAAAATCCTGAAGAAACTAGTACTGCCTAATGGATCAGTCTTAAGAGCAAGATATGCAGGTCGTCCTACTCGAGATTGTTTGTTTCAAGATCCTGTAATGGATGGTAAAAGTCTGCTGAAAATTTGGAACTTGAACAAGCTGACCGGGGTAATAGGCGTCTTTAATTGCCAAGGAGCGGGAAGTTGGCCAATGAAATCATCAGAAGTCACACCGACACACTTAACCATTTCAGAGAAAATTAGGCCACTTGATGTTGAGTTTCTTGAAGACATGGCAAGTGAAAACTGGAATGGAGACTGCATATTATATGCCTTCAATGCAGGCTTGCTTTCCAAGCTACCAAGTGGAGGAAAACTACAAGTGTCCTTGAAGACTCTTCAATGTGAAGTATATACAGTATGTCCAATCCGGGTGTTTGGTAATGTTGTACAATTTGCACCAATTGGATTGCTTGACATGTACAATTCAGGAGGAGCTGTAGAAGAACTGTTGTGTACAATGGATGTTGCAGATTGCATGATAGTAAAAATCAAAAGCAGAGGAGGTGGCCGTTTTGGAGCATACTCCAACGTCAGACCGAAGAGTTGCTTGGTGGACATGGAGGAGGAGGAGTTTTGTTACAATTCTGAAGATGGATTACTGACAATTAAACTTGATGGTGAAGGCAATTCAAAGCACATCGAACTTGTATTCTAA 2253 0.4115 MTNTVVPTVKNQCLTVKDRVILTRVPENIVVSPLSAGSAFLGATSPIPSSCHLFTLGTLLGFRLLSLFRVKIWWMIPRVGRSASDVPMETQLLLVEAREETAFKPEFSSDSQELEEDNISYILFLPVLDGAFRATLQGTAFNELQFCVESGDACVQTSQSLEAVFVNSGDNPFELIKDSIKILEKHKGTFCHLENKEIPVHLDWFGWCTWDAFYTQVNPQGIKDGIQSLSSGGFTPKFVIVDDGWQEGLNEFHKEGEPIVEGTQFATRLIGIKENKKFSNAGSNNSCNNLHDFVHFIKQNLSVKYIYMWHALAGYWGGVLPSSDAMKKYNPKLTYPIQSPGNTGNLRDIAMDSLEKYGVGIIDPSKLYEFYNDFHKYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKQYQEALETSISRNFKRNNLICCMCHNSDSIYSSKKSAVARASEDFMPREPTFQTLHIASVAFNSLLLGEIFVPDWDMFHSKHETAEFHAAARAIGGCAVYVSDKPGNHDFKILKKLVLPNGSVLRARYAGRPTRDCLFQDPVMDGKSLLKIWNLNKLTGVIGVFNCQGAGSWPMKSSEVTPTHLTISEKIRPLDVEFLEDMASENWNGDCILYAFNAGLLSKLPSGGKLQVSLKTLQCEVYTVCPIRVFGNVVQFAPIGLLDMYNSGGAVEELLCTMDVADCMIVKIKSRGGGRFGAYSNVRPKSCLVDMEEEEFCYNSEDGLLTIKLDGEGNSKHIELVF 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01950 750 Gene3D Aldolase class I 203 527 IPR013785 -
Vifa2g01950 750 Pfam Raffinose synthase or seed imbibition protein Sip1 9 736 IPR008811 -
Vifa2g01950 750 SUPERFAMILY (Trans)glycosidases 201 534 IPR017853 -
Vifa2g01950 750 PANTHER - 9 747 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01950 Vifa-Chr2 504366721 504371133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01950 1 737 Glycoside Hydrolase AT1G55740 48.936 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01950 - - psat:127083742 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01950 2 504366721 504371133 Vifa2g01950 2 504366721 504371133 ECH