Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01941 ATGGCTACGAGTGAAAGCGGCGACGGAAACCACAACCCTGCTTTTGACCCGGATTTGGATACTCCGGCCATCACGGGTGACGAGTTTGCTGAGTTTGGTGCCGGTTGTTTCTGGGGTGTGGAGCTGGCTTTTCAGCGAGTTGTAGGAGTTGTGAAGACTGAAGTTGGATATTCACAGGGTCATACACCGGATCCAACCTACAAATTGGTCTGCACCGGAAGTACTAACCATGTTGAAGTGGTAAGGGTTCAGTTTGACCCGAAAGTATGTCCTTACACTAATCTCTTGGATCTCTTTTGGTCACGACATGACCCCACTACCCTCAATCGCCAGAGAGGTGATGTGGGTGTACAATATAGATCAGGAATTTACTACTACAATGAAACCCAGGCTCGTTTAGCTCAAGAATCAAAAGATGCTAAACAGTTGGAACATAAGAACAAAATTGTAACAGAAATACTTCCAGCAAAGAGGTTTTATAGAGCAGAGGAATATCATCAGCAATATTTGGAGAAGGGTGGAGGCCAAGGCCTCAGTCAGTCTGCTGAAAAGGGTTGCACTGATCCCATAAGGTGCTATGGCTAA 585 0.4615 MATSESGDGNHNPAFDPDLDTPAITGDEFAEFGAGCFWGVELAFQRVVGVVKTEVGYSQGHTPDPTYKLVCTGSTNHVEVVRVQFDPKVCPYTNLLDLFWSRHDPTTLNRQRGDVGVQYRSGIYYYNETQARLAQESKDAKQLEHKNKIVTEILPAKRFYRAEEYHQQYLEKGGGQGLSQSAEKGCTDPIRCYG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01941 194 MobiDBLite consensus disorder prediction 1 20 - -
Vifa2g01941 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Vifa2g01941 194 Gene3D Peptide methionine sulphoxide reductase MsrA 18 194 IPR036509 GO:0008113
Vifa2g01941 194 Coils Coil 126 146 - -
Vifa2g01941 194 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Vifa2g01941 194 SUPERFAMILY Peptide methionine sulfoxide reductase 22 175 IPR036509 GO:0008113
Vifa2g01941 194 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 25 193 - -
Vifa2g01941 194 FunFam Peptide methionine sulfoxide reductase 16 194 - -
Vifa2g01941 194 NCBIfam peptide-methionine (S)-S-oxide reductase MsrA 29 172 IPR002569 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01941 Vifa-Chr2 502021569 502022281 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01941 K07304 - gmx:100527085 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01941 2 502021569 502022281 Vifa2g01941 2 502021569 502022281 ECH