Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01937 ATGGCGGATGATGGCAAACAGAGCGTGAGACTGCTATGCCGCCCAAAGCAACTCAGCAAAGGATCCGACCCGGGTATCCATTACTGGTTAATCGGATCCCCATTCTTACCGCCACTTACCATCGTCTCCATCCTCCGATGCATCAACACCATCCCCTCCTCCACCTCTCCCGATTTACACAAAGAATCAAACGAACTTCTAACCTTAATTCCGAAAGGCTTTCAACTAATCGGAGCCCTAGCTTCCGGAGACGAAACCGATGCTCGTGCCGCAATCGATGCCGCTAGTCAATTGAGGAAGTTTCTTTGCGGCGGAGGAACAGTGGAAGACCTACCGCTGATCGGAGGTGTTTCCGATTTGGATTCCGGCGATTTCCGATTTTTTGCGTGTGAGAGTGGAAACGCGAATAGCAGAATTGAGCTTGTTACATCGATCATACAGGAACAACATCCCGAGAAGTTTTTGTGGGAGAATGGTTGCATGCTTCGTTGTGAGCTTCCGATTAAGTTGCCAGTTTATTACCCTCTCAAAAATCCTACTGATGTTGAGAAAGCATATGTAAAGGCAACCGGAGCTGTTATTGCCAAGTTAAGAGACCCTCAGGCTGTGTACATGTTGGAAGCATTGAGCAAAACCTGTCCAGGTCAACCTCCACCTGCCATAGTTCGAGGTGTACAATTAGACTTTCACACAGACCTCTCCAGAACCAAGCCTTTGGCTAAGGGTGACGAGGGCTTTGATGCAAGCTCACTATCCTGCTCATACTTTACCATCAGCAATAAAGCAGCTTTTTCCATAGAGAGTGCAGATACTATCCAAGTGAGTGTTCTATTTAATAGCTTAGGACCGTCATCAGCATCTGCTACACCAATTGCAGAATATATTCCAGTCCTGGAAGAAGCCAGACTCGTTGTTGTGGATATTAAGCTAGATGTACTCTGCTATTCTTCCAGGGATCTTCCACTCAGACATGCAGTTTCACGTTTAATCATCCCTGGCTTAATTGACCAGTTAAATACCATGCAGAACTTTATGTTGCCTAGCCTTCTGGTACAACATCCTCAGCTAAAACCTTATCACTTTAGTCCTCCTGGGATTCTGCATCCAATAACTGTTTTCTATGAACTGAGTTTTGGGGAGACAGAAATGAAGCAAGTTGACTTTAGGAAATCCTTGCACTTTAGGTTGGGGCTACCTTATGATCGTCCCCTTCTAAGAATTGCCAATGCCTTAGATTTTTCAAAATTGAAAAATGGTGGTTCTGCCTCTCTGCAGAAACGTTCAGCTTTGCTCAGAGATGTACACATTGGGATTCCAAGCAGCGGGGTTAATGGGGGAACTCTTTCCCTTGTTCAAGGTTCCTATGAATACCATCATTATCTTCAGGATGGTTTCAATGATTCGGGGTGGGGTTGTGCTTATCGGTCCCTTCAGACTATCATTTCATGGTTCAGACTCCAAAACTACTCATCTATAGAAGTTCCTTCTCATAGAGAAATACAGCAGTCACTTGTCGAGATTGGTGATAAAGATCCTTCTTTTATTGGGTCACGAGAGTGGATTGGTGCCATTGAGTTGAGCTTTGTTTTGGACAAACTTCTGGGTGTTACTTGCAAAGTCATGAATGTTAGATCTGGAGCCGAGCTTCCGGAAAAATGCCGAGAGCTAGCATTGCACTTTGAGACCCAAAGTACACCTATTATGATTGGTGGTGGTGTACTTGCATATACACTACTGGGAGTGGATTACAATGATGCAACTGGAGATTGCGCATTTTTAATACTTGATCCACACTATACAGGTACGGATGACCTGAAGAAAGTAATCAATGGGGGGTGGTGTGGGTGGAAAAAAGCTGTTGATAGCAAGGGAAAGAATTTCTTCTTGCACGATAAGTTTTACAATCTACTGCTGCCACAGAGGCCTAACATGGTTTGA 1938 0.4469 MADDGKQSVRLLCRPKQLSKGSDPGIHYWLIGSPFLPPLTIVSILRCINTIPSSTSPDLHKESNELLTLIPKGFQLIGALASGDETDARAAIDAASQLRKFLCGGGTVEDLPLIGGVSDLDSGDFRFFACESGNANSRIELVTSIIQEQHPEKFLWENGCMLRCELPIKLPVYYPLKNPTDVEKAYVKATGAVIAKLRDPQAVYMLEALSKTCPGQPPPAIVRGVQLDFHTDLSRTKPLAKGDEGFDASSLSCSYFTISNKAAFSIESADTIQVSVLFNSLGPSSASATPIAEYIPVLEEARLVVVDIKLDVLCYSSRDLPLRHAVSRLIIPGLIDQLNTMQNFMLPSLLVQHPQLKPYHFSPPGILHPITVFYELSFGETEMKQVDFRKSLHFRLGLPYDRPLLRIANALDFSKLKNGGSASLQKRSALLRDVHIGIPSSGVNGGTLSLVQGSYEYHHYLQDGFNDSGWGCAYRSLQTIISWFRLQNYSSIEVPSHREIQQSLVEIGDKDPSFIGSREWIGAIELSFVLDKLLGVTCKVMNVRSGAELPEKCRELALHFETQSTPIMIGGGVLAYTLLGVDYNDATGDCAFLILDPHYTGTDDLKKVINGGWCGWKKAVDSKGKNFFLHDKFYNLLLPQRPNMV 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01937 645 Pfam Peptidase family C78 448 637 IPR012462 -
Vifa2g01937 645 Gene3D - 428 645 - -
Vifa2g01937 645 PANTHER UFM1-SPECIFIC PROTEASE 2 70 645 - -
Vifa2g01937 645 SUPERFAMILY Cysteine proteinases 465 602 IPR038765 -
Vifa2g01937 645 FunFam Probable Ufm1-specific protease 2 428 645 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01937 K01376 - gmx:100819651 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01937 2 501496422 501501325 Vifa2g01937 2 501496422 501501325 ECH