Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01935 ATGGCATCAGCAAATAGCATCATCTCCATATCCTCTGCTTCGTTGTTGAATCGAACTCCTCAATCAAAAGCAACATCACTAATTAGCCTCCTAATACACAACCAAGATCATGAACAACGTTGTACTTCAAAATCCTCTTTCACCACCGCTCTTAAGATATCAACTCCAACAACCACAAGGCGTAGGTTGAGTTGCTCAGCCTCAGCTTCTGAAGCTTCAACGCTGCCCTCTGCTCTTCTTTTTGACTGCGATGGAGTTCTTGTTGACACTGAGAAAGATGGCCACCGCATTTCTTTCAATGACACCTTCCAAGAGAAAGAACTCGGAGTTACATGGGACGTGGAATTGTACGGTGAATTGCTCAAAATCGGAGGCGGAAAAGAAAGGATGACAGCGTACTTTAATAAGACGGGCTGGCCAGCAAACGCTCCGACAGGTGAACAAGAAAGGAAAGATTTCATAGCTTCACTTCACAAGCGAAAGACAGAGTTATTCATGGTGCTTATTGAGAAAAAACTGTTGCCTCTTCGCCCAGGTGTTGCAAAGCTTATTGATCAGGCTTTAACTCAAGGAGTCAATGTTGCAGTTTGCAGCACTTCCAATGAGAAGGCGGTCTCTGCTATAGTATCGTTTTTACTGGGACCTGAGCGAGCAGAAAAAATCCAGATATTTGCAGGAGACGTAGTTCCCCGCAAAAAGCCTGATCCGGCCATTTATTTATTAGCAGCCAGCACTCTCGGTGTCGAACCTTCAAGATGTGTCGTGGTCGAAGACAGTGCCATAGGCCTAGCAGCTGCTAAAGGAGCTGGGATGAAGTGTATAGTAACAAAGAGCGGATATACAGCAGATGAAGATTTCCTGAATGCAGATGCTGTATTCGACTTCATTGGTGATCCTCCTGAGGAGAGATTCGATTTAGCATTTTGTGGTAACCTTCTTGAGAAGCAATTTGTCAGCTAG 960 0.4479 MASANSIISISSASLLNRTPQSKATSLISLLIHNQDHEQRCTSKSSFTTALKISTPTTTRRRLSCSASASEASTLPSALLFDCDGVLVDTEKDGHRISFNDTFQEKELGVTWDVELYGELLKIGGGKERMTAYFNKTGWPANAPTGEQERKDFIASLHKRKTELFMVLIEKKLLPLRPGVAKLIDQALTQGVNVAVCSTSNEKAVSAIVSFLLGPERAEKIQIFAGDVVPRKKPDPAIYLLAASTLGVEPSRCVVVEDSAIGLAAAKGAGMKCIVTKSGYTADEDFLNADAVFDFIGDPPEERFDLAFCGNLLEKQFVS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01935 319 CDD HAD_CbbY-like 78 278 - -
Vifa2g01935 319 NCBIfam HAD-IA family hydrolase 159 275 IPR006439 -
Vifa2g01935 319 Gene3D - 78 294 IPR023214 -
Vifa2g01935 319 FunFam HAD family hydrolase 169 292 - -
Vifa2g01935 319 PANTHER XYLULOSE-1,5-BISPHOSPHATE (XUBP) PHOSPHATASE 40 314 IPR044999 GO:0016787
Vifa2g01935 319 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 74 302 - -
Vifa2g01935 319 Pfam Haloacid dehalogenase-like hydrolase 79 275 IPR041492 -
Vifa2g01935 319 Gene3D Putative phosphatase; domain 2 90 174 IPR023198 -
Vifa2g01935 319 SUPERFAMILY HAD-like 77 295 IPR036412 -
Vifa2g01935 319 SFLD phosphoglycolate phosphatase 74 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01935 Vifa-Chr2 501408556 501410823 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01935 - - gmx:100816266 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01935 2 501408556 501410823 Vifa2g01935 2 501408556 501410823 ECH