Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01929 ATGAAACGGTTTTTCCAAGTAATAGAGAAAGATTCAGAGAAAGGTTTGAAGAAAGCGAAAGAGAATGAAAAAGAAGAAGAGAACGAAAACGAAACGAACAAGGAAGGACCACTGAAGTTCGTGAGTTGGAACGCCAACAGTTTATTCCTTCGCGTGAAGAACAACTGGTCCGAATTCTCCAACTTCATCACCACCTTCGATCCCGATGTCATCGCCATTCAAGAAGTTCGAATGCCCGCCGCTGCTTCCGGTTCCCAATCCAAGTCCGCTCCTAAAAATCAAGGTGAAATTAAAGATGACACTAACTCCGCCAGGGAAGAAAAAAGGATATTGATGCGTGCACTTTCAAATCCACCGTTTGGAAACTATCGTGTTTGGTGGTCTCTTGCAGATTCAAAATATGCAGGGACAGCACTATTTGTGAAAAAATGTTTCAAGCCAAAAACTGTTGTTTTCAATCTTGATAAAATAGCTTCAAAACATGAACCAGATGGCCGGGTAATCTTAGTTGAATTTGAAACATTCCGTTTGTTGAATACATATGTACCAAATAATGGGTGGAAAGAGGAGCCAAACTCATTTCAAAGGAGAAGAAAATGGGACAGCAGAATCCTGGAATTTGTTCACCAAAATTCGGACAAGCCTTTGATATGGTGTGGGGATCTGAATGTCAGCCATGAAGAGATCGATGTGAGTCATCCTGAGTTTTTCATTACAGCAAAACAAAATGGTTATGTTCCTCCAAACAAAGAGGATTGTGGGCAGCCTGGATTTACCTTGGCTGAAAGAGCACGATTTGGTACCATCTTAAGAGAGGGAAAGCTGGTAGATGCCTACAGATTTCTGCACAAGAATAAGGACATGGAGCAAGGCTTCTCATGGTCTGGAAACCCGATTGGGAGGTACCGTGGAAAACGAATGAGAATAGACTATTTTTTAGTTTCTGATAAACTTGAAGAAAAGATTGTTGCGTGTGACATGCACGGACAAGGGATAGAGTTAAAAGGTTTCTATGGAAGTGATCATTGCCCAGTTACCTTGGAGCTCTCTCCTAGTTCCAACTCTCAAAATGAGGATTCAATATAA 1086 0.4134 MKRFFQVIEKDSEKGLKKAKENEKEEENENETNKEGPLKFVSWNANSLFLRVKNNWSEFSNFITTFDPDVIAIQEVRMPAAASGSQSKSAPKNQGEIKDDTNSAREEKRILMRALSNPPFGNYRVWWSLADSKYAGTALFVKKCFKPKTVVFNLDKIASKHEPDGRVILVEFETFRLLNTYVPNNGWKEEPNSFQRRRKWDSRILEFVHQNSDKPLIWCGDLNVSHEEIDVSHPEFFITAKQNGYVPPNKEDCGQPGFTLAERARFGTILREGKLVDAYRFLHKNKDMEQGFSWSGNPIGRYRGKRMRIDYFLVSDKLEEKIVACDMHGQGIELKGFYGSDHCPVTLELSPSSNSQNEDSI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01929 361 NCBIfam exodeoxyribonuclease III 38 349 IPR004808 GO:0004518|GO:0006281
Vifa2g01929 361 ProSiteProfiles AP endonucleases family 1 profile. 38 351 IPR004808 GO:0004518|GO:0006281
Vifa2g01929 361 Gene3D Endonuclease/exonuclease/phosphatase 5 351 IPR036691 -
Vifa2g01929 361 CDD Ape1-like_AP-endo 38 349 - -
Vifa2g01929 361 Coils Coil 9 36 - -
Vifa2g01929 361 MobiDBLite consensus disorder prediction 14 34 - -
Vifa2g01929 361 Pfam Endonuclease/Exonuclease/phosphatase family 42 342 IPR005135 GO:0003824
Vifa2g01929 361 SUPERFAMILY DNase I-like 38 349 IPR036691 -
Vifa2g01929 361 FunFam DNA-(apurinic or apyrimidinic site) lyase 10 351 - -
Vifa2g01929 361 PANTHER AP ENDONUCLEASE 21 350 IPR004808 GO:0004518|GO:0006281
Vifa2g01929 361 MobiDBLite consensus disorder prediction 81 103 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01929 - - gmx:100817167 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01929 2 499743988 499749782 Vifa2g01929 2 499743988 499749782 ECH