Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01924 ATGGTTAGGCCTCGCGATAACTGGGAGAAGCTTGTTCGAGCGACGCTGAAAAGGGAGCAGCTCAGAAATGCCGGTCAGGGCCATGCTAGACACCCGAGCGGAATCGCCGGCGCTGTTCCGCCTTCTCTCGCTCAAACGACTAACGTTGATTTGATTTTGCAAGCTGCCGATGATATTCAACAGGAGGACCCTAACGTCGCCAGGATCTTGTGTGAGCAGGCATATAGTATGGCTCAAAATCTCGATCCAAACAGTAATGGCAGAGGAGTTCTTCAGTTCAAGACTGGTTTAATGTCAGTTATTAAGCAAAAACTTGCTAAAGAAGGAGGGGTTCAAACTGACCGCAATCACGACATTGAAAACCTGTGGGAGTTTTATCAACGCTACAAGCAACAACATAGAGTGGATGACATCCAACGAGAAGAACAAAGATTGCAAGAGTCTGGAACTTTTAGCTCTACACTAGGAGAGTTAGAACTTAGATCATCAGAAATGAGAAAGATAATTTCCACTCTCCGCGCCTTAGTGGAGGTTTTGGAGGCACTTAGCAAGGATGCAGATCCCAATGGAGTTGGTGGCCTCATAATGGAGGAGTTGAGAAAACTAAAAAAGTCAAGCGCGACGTTATCTGGAGAGTTGACGCCTTACAATATTGTTCCTCTAGACGCGCCGTCATTAATCAATCCTATCAGAATTTTCCCAGAAGTTAGAGGGGCAATTTCTTCAATCAGATATACTGAACAATTCCCTAGACTTCCTGCTGGATTTAAAGTATCTGGAAAACGGGATGCAGACATGTTTGATCTTTTGGAATTCGTGTTTGGCTTCCAGAAAGATAATGTAAGGAACCAGCGTGAAAATGTTGTTTTGATGATAGCAAATGCGCAGTCGCGACTTGGCATACCTGCTGAGTCTGATCCAAAAATAGACGAGAAAACGGTCAATGAAGTCATCTTGAAGGTGCTGGATAACTATATCAAGTGGTGTCGATATTTGCGAATTCGTCTTGCATGGAATAGTTTAGAGGCAATTAACCGTGATAGGAAGCTTATTTTGGTTTCTCTATATTTTCTTATTTGGGGTGAAGCTGCCAATGTCCGGTTTCTCCCAGAGTGCATTTGCTATATATTCCACCACATGGCTAAAGAACTGGATGCTATTTTGGATCATCGAGAAGCCGAAGCTGCAGTCAGCTGCTTAACTGAGGATGGTACTGCGAAGTTCCTTGAGAAAATCATTTGTCCTATATATGAAACCCTAGCTGATGAGGCTCATTACAAAAATGGAAAAGCTGCACATTCAGCATGGAGAAATTATGATGATTTCAATGAATATTTTTGGTCGCCTGCTTGTTTTGAAATAGGCTGGCCAATGAGGAGTTCTTCACCGTTCTTCCTTAAGCCGAAAAAATCGAAAAGGACTGGTAAAAGCAGTTTTGTTGAACATAGAACGTTTCTTCACTTATATCGAAGTTTCCACCGTCTCTGGATCTTTTTGGCATTAATGTTTCAGGCTTTGACAATTATTGCTTTCAATCATGGACATATCAACCTGAATACTTTTAAAACAGTACTTAGCATTGGGCCATCATTTGCAATCATGAATTTCATTAAGAGTTGCTTGGATGTGTTGCTCACATTTGGGTCATACAAAACTGCAAGGGGCATGGCTGTTTCAAGGCTAGTAATAAGGTTTTTTTGGGGTGGCTTGACTTCTGCGTTTGTAACATATGTTTACCTGAAGGTTTTACAGGAGAGGCGGCATAGTAATAACTCTGACAATTCGTTCTATTTCCGGATATACCTGCTTGTACTGGGCGTTTATGCAGCTATACGCCTATTCTTTGCATTGCTGCTCAAAATTCCAGCCTGTCATGCACTTTCTGAAATGTCTGATCAATCGTTCTTTCAGTTTTTTAAGTGGATATATCAAGAACGGTACTACGTTGGACGAGGTCTTTATGAGAAAATGAGTGACTACTGCAGGTATGTGGCCTATTGGTTGATCGTACTTGCTTGCAAATTTACTTTTGCATACTTTCTCCAGATAAGACCTCTTGTTAAACCTACCAATATCATTGCGGATCTTCCATCTTTGACTTATTCTTGGCATGATTTTATCTCAAAGAATAATAACAATGCCTTGACAATAGTTAGCTTGTGGGCTCCTGTTGTGGCTGTGAGTATTCTAGAATTCCTCTTTTTTCTCATTAATGTTAGAAAACTGTTGTTTGAACATGCATTTAAGCAAGTTTTTTTGGTTATGTTCCCGGAGGAAAGCACTGAACCAACGAAAATAGATGTTGTCAATAGTGCTGCTATAGCGGAAAAGCCTCACAATGATATGGTTCGGTGCAAATTGCGATGTCATCTTCCTGCAAGCCGCTTTATGGCAGTCGTGAATAATGAGAAAATCGCAGACAGGTTGCGACCTGAACTTGGAATTACGCCAGCTATTTGGGTACTAAGTATGACTGCAGATATGAACTTCCATTGTGGTTCGTTCGTTCGTAGTAACAGGCACCAAGGAAGATCCATCATAAATGGACCACTGTTCTGCGGTTTCAATTCAAGAAGGGTCGTTGGGAGTGGATTTGATTGCGGTATACTCAACAAAAGTTGCAAGTTGTGTACGACTTATTCCTCCCATGTGTTGTCTGGTTGCGTGACTTGTTTTTTCTCCTCCTCCGCATCTTCCTTTTCCGGTATCATCTCTGTTTGGAACTCAGTTTTTCGATGGTTCTTTAACACATCTGCTACCTGCAACACGTCCCAACCAGAACCGATGTTTTATGTGGGAACATACCCCATATGCTTCGCCATCTCCGCATTCAGCAATTCACGAAACTCTGACACAGGATTGTTTCCGACACTTCACCGGCAGTATCAAGCAGTTTCCATTATGCTGCAATTTTCAGCAATTATCCAGCAGTTTCGGACAGTTATACGGCTGTTCTTCGGTAGTTTCAGGCAGTTACACAGCATTAACAATTCATTGGCTCCGTCTCGAGATCCCATTTATCTCATGGATCTTCATATTTGGTACACTGTCATGTCAGCAATCGTAGGTGGTGTAATTGGTGCCCGGGCTCGGTTAGGCGAGATACGGTCAATTGAAATGGTGCATAAACGTTTTGAGAGTTTCCCGAAGGCATTTGTAAAAAATATGGTCTCTCCGCAAGCAAAAAGGATTCCCATCAATGGACCATCAACTCAGGATTCTCAGGATATGAACAAAGCATATGCTGCCATGTTTGCTCCATTTTGGAATGAGATAATCAAAAGCCTGCGTGAGGAAGATTATATTAGCAATAGGGAAATGGACCTACTTTCTATTCCTAGCAATGCAGGAACTCTGGGATTAGTTCAATGGCCTTTGTTTCTGCTAAGCAGTAAGATCCTGTTGGCGGTAGATTTGGCCGTGGACTGCAAAGATACACAGGCAGATCTGTGGAGCAGGATCTCTAGGGATGAATATATGGCATATGCAGTTCAGGAGTGCTATCGCAGTATTGAAAAAATATTATATTCATTAGTTGATAACGAAGGAAGACTTTGGGTGGAAAGAATTTTTCGGGAGATCAATAACAGTATATCAGCGGATTCACTTTTTATAACCTTGACTCTCAAGAAGCTTCCGCTTGTTATGTCTAGACTTACGGCATTGACTGGACTTCTGACTCGAAATGATCCTGCACTTGCAAAAGGTGCTGCAAAAGCTGTTTATGAGCTGTATGACGTTGTTACTCATGACCTGGTGTCCTCTGATTTAAGAGAGAATCTTGATACATGGAACATTTTAGCAAGGGCTAGGGATGAGGGCCGCCTTTTTTCTAGGATACAGTGGCCTAATGATCCTGAAATTAAAGAGCTTGTTAAGCGGTTGCATCTTCTGCTCACTGTAAAAGACTCTGCTGCTAATGTTCCAAAAAATCTAGAAGCTAGGAGAAGACTAGAGTTTTTCACAAATTCATTATTTATGGATATGCCTTCAGCAAAACCTGTTAGTGAAACATTGCCATTCAGCGTTTTCACTCCATACTATAGTGAAACTGTGCTTTATAGTACATCTGAATTACAGAAGGAGAATGAAGATGGAATATCTATTCTATTCTATCTTCAAAAGATATTTCCAGATGAATGGGACAACTTTCTTGAAAGAATTGGCCGAGTTTCATCTACTGAGGATGCAGAACTTCAAGAAAGTTCTAGTGACACTTTGGAACTTCGTTTTTGGGCATCTTATCGAGGGCAGACTCTGGCAAGAACAGTACGTGGCATGATGTATTACAGAAGAGCTTTGGTGCTGCAGAGCTATTTAGAGAGAAGATCACTGGGAGTGGACAATTATTCTCAGAACAATTTCATTACAAGTCAAGGTTTTGAATCATCACGAGAATCACGGGCACAAGCAGATTTGAAGTTTACTTATGTTGTATCATGCCAAATTTATGGTCAACAGAAGCAGCGAAAGGCACCAGAAGCTGCTGATATTGCTTTGTTGTTGCAGAGGAATGAGGGTCTCCGAGTTGCTTTTATTCATGTTGATGAAAGTACAATTGATGAAAACTTCCCACGAGTGTTTTATTCAAAGCTTGTCAAAGCCGATATAAACGGAAAGGATCAGGAAATATATTCTATCAAACTTCCTGGGGATCCAAAGCTCGGTGAAGGAAAGCCTGAGAATCAAAACCATGCAATAGTATTCACTCGTGGTGATGCACTTCAAACTATTGATATGAATCAGGACAATTATCTTGAGGAGGCGATGAAAATGAGAAATCTTCTCGAGGAGTTTCATGCGAATCATGGCCGTCGCCCTCCAACCATTCTCGGAGTGAGGGAACATGTTTTTACGGGAAGTGTCTCATCCTTGGCTTGGTTCATGTCGAATCAAGAAACTAGCTTTGTAACCTTAGCTCAGCGTGTTTTAGCTAATCCTCTCAAAGTCCGCATGCACTATGGGCACCCAGATGTATTTGACAGAATATTTCATATAACCCGAGGAGGGATTAGTAAAGCTTCTCGTGTTATTAATATTAGTGAAGATATATATGCTGGCTTCAACTCTACGCTGCGGCTTGGAAATGTCACGCACCATGAATACATCCAGGTTGGAAAAGGAAGGGATGTTGGTTTAAACCAGATTGCTCTCTTTGAAGGGAAAGTAGCAGGTGGTAATGGAGAGCAAGTGCTTAGCAGGGATATTTACAGGCTTGGACAACTGTTTGATTTCTTCAGAATGCTTTCTTTCTACTTCACAACTGTTGGTTATTATGTTTGTACCATGATGACAGTCCTAACAGTGTATATATTTCTGTATGGGAGAGCATACCTGGCATTTTCTGGTCTCGATGAAGCTGTCTCCGAAAAGGCAAAGCTGATGGGTAACACGGCACTCGATGCAGCTTTGAATGCTCAGTTTTTGGTGCAGATTGGTGTTTTTACTGCAGTACCAATGATAATGGGTTTTATACTTGAATTAGGATTACTGAAGGCTATTTTTAGTTTCATCACAATGCAACTTCAGTTGTGTTCTGTCTTCTTCACTTTCTCTTTGGGAACCAAAACTCATTATTTTGGGCGTACTGTTCTCCATGGAGGTGCTAAATACCGAGCAACTGGTAGAGGGTTTGTTGTCCGCCACATAAAGTTTGCTGAAAATTACAGACTTTATTCTCGAAGCCACTTTGTCAAAGCGCTTGAAGTAGCGCTTCTACTTATAGTTTACATTGCATATGGATATGCAGAGGGAGGTGCTGTTACATATGTTTTGCTAACTCTAAGCAGTTGGTTCCTTGTCATTTCTTGGCTTTTTGCTCCTTACATTTTCAACCCTTCTGGTTTCGAGTGGCAAAAGACTGTGGAAGATTTTGATGATTGGACAAGTTGGCTCCTTTACAAAGGAGGAGTAGGAGTGAAGGGAGAAAATAGTTGGGAGTCTTGGTGGCTGGAAGAACAGATGCATATTCAAACTGTGAGGGGTCGTATCTTGGAGACAATTTTGAGTGCAAGGTTCTTCTTGTTTCAATATGGTGTTGTGTATAAGCTACATCTTACTGGAAAGGATACATCACTTGCGATATATGGATTCTCATGGGCTGTATTGGTTGGATTTGTCTTGATATTTAAGATCTTTACTTACAGCCCAAAAAAATCGGACGATTTTCAGCTTGTATTGAGATTCTTACAGGGAGTTGTATCTATAGGCCTTGTTGCAGCTGTGTGTCTTGTTGTTGCTTTTACTCCACTTTCAATACCTGACCTTTTCGCGAGTATCCTTGCTTTTATCCCCACCGGATGGGGAATATTATCTTTGGCAATTACATGGAAGGGTCTAATGAAAAGTCTTGGCTTGTGGGATTCTGTGCGCGAGTTTGCTAGAATGTATGATGCTGGAATGGGTATGATTATTTTTTCACCAATAGCGTTTTTATCCTGGTTTCCGTTCATTTCAACATTCCAGTCCCGCCTTCTGTTCAATCAAGCCTTCAGCCGGGGTCTTGAAATCTCCCTCATCCTTTCTGGAAACAAAGCTAACGTCGAGGCATAA 6552 0.415 MVRPRDNWEKLVRATLKREQLRNAGQGHARHPSGIAGAVPPSLAQTTNVDLILQAADDIQQEDPNVARILCEQAYSMAQNLDPNSNGRGVLQFKTGLMSVIKQKLAKEGGVQTDRNHDIENLWEFYQRYKQQHRVDDIQREEQRLQESGTFSSTLGELELRSSEMRKIISTLRALVEVLEALSKDADPNGVGGLIMEELRKLKKSSATLSGELTPYNIVPLDAPSLINPIRIFPEVRGAISSIRYTEQFPRLPAGFKVSGKRDADMFDLLEFVFGFQKDNVRNQRENVVLMIANAQSRLGIPAESDPKIDEKTVNEVILKVLDNYIKWCRYLRIRLAWNSLEAINRDRKLILVSLYFLIWGEAANVRFLPECICYIFHHMAKELDAILDHREAEAAVSCLTEDGTAKFLEKIICPIYETLADEAHYKNGKAAHSAWRNYDDFNEYFWSPACFEIGWPMRSSSPFFLKPKKSKRTGKSSFVEHRTFLHLYRSFHRLWIFLALMFQALTIIAFNHGHINLNTFKTVLSIGPSFAIMNFIKSCLDVLLTFGSYKTARGMAVSRLVIRFFWGGLTSAFVTYVYLKVLQERRHSNNSDNSFYFRIYLLVLGVYAAIRLFFALLLKIPACHALSEMSDQSFFQFFKWIYQERYYVGRGLYEKMSDYCRYVAYWLIVLACKFTFAYFLQIRPLVKPTNIIADLPSLTYSWHDFISKNNNNALTIVSLWAPVVAVSILEFLFFLINVRKLLFEHAFKQVFLVMFPEESTEPTKIDVVNSAAIAEKPHNDMVRCKLRCHLPASRFMAVVNNEKIADRLRPELGITPAIWVLSMTADMNFHCGSFVRSNRHQGRSIINGPLFCGFNSRRVVGSGFDCGILNKSCKLCTTYSSHVLSGCVTCFFSSSASSFSGIISVWNSVFRWFFNTSATCNTSQPEPMFYVGTYPICFAISAFSNSRNSDTGLFPTLHRQYQAVSIMLQFSAIIQQFRTVIRLFFGSFRQLHSINNSLAPSRDPIYLMDLHIWYTVMSAIVGGVIGARARLGEIRSIEMVHKRFESFPKAFVKNMVSPQAKRIPINGPSTQDSQDMNKAYAAMFAPFWNEIIKSLREEDYISNREMDLLSIPSNAGTLGLVQWPLFLLSSKILLAVDLAVDCKDTQADLWSRISRDEYMAYAVQECYRSIEKILYSLVDNEGRLWVERIFREINNSISADSLFITLTLKKLPLVMSRLTALTGLLTRNDPALAKGAAKAVYELYDVVTHDLVSSDLRENLDTWNILARARDEGRLFSRIQWPNDPEIKELVKRLHLLLTVKDSAANVPKNLEARRRLEFFTNSLFMDMPSAKPVSETLPFSVFTPYYSETVLYSTSELQKENEDGISILFYLQKIFPDEWDNFLERIGRVSSTEDAELQESSSDTLELRFWASYRGQTLARTVRGMMYYRRALVLQSYLERRSLGVDNYSQNNFITSQGFESSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEGLRVAFIHVDESTIDENFPRVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIVFTRGDALQTIDMNQDNYLEEAMKMRNLLEEFHANHGRRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLAQRVLANPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRLGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMLSFYFTTVGYYVCTMMTVLTVYIFLYGRAYLAFSGLDEAVSEKAKLMGNTALDAALNAQFLVQIGVFTAVPMIMGFILELGLLKAIFSFITMQLQLCSVFFTFSLGTKTHYFGRTVLHGGAKYRATGRGFVVRHIKFAENYRLYSRSHFVKALEVALLLIVYIAYGYAEGGAVTYVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLLYKGGVGVKGENSWESWWLEEQMHIQTVRGRILETILSARFFLFQYGVVYKLHLTGKDTSLAIYGFSWAVLVGFVLIFKIFTYSPKKSDDFQLVLRFLQGVVSIGLVAAVCLVVAFTPLSIPDLFASILAFIPTGWGILSLAITWKGLMKSLGLWDSVREFARMYDAGMGMIIFSPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILSGNKANVEA 2183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01924 2183 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 225 731 - -
Vifa2g01924 2183 SMART FKS1_dom1_2 347 459 IPR026899 -
Vifa2g01924 2183 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 456 IPR026899 -
Vifa2g01924 2183 Pfam 1,3-beta-glucan synthase component 1308 2078 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01924 Vifa-Chr2 498089873 498137339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01924 1 731 Glycosyltransferase AT2G36850 70.884 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01924 K11000 - gmx:100777959 2176.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01924 2 498089873 498137339 Vifa2g01924 2 498089873 498137339 ECH