Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01911 ATGCAAGTCTTTCCCAATTCTTATCTCTTCACTTTTCCTAAACCCTTAAACCCTCCCTCTCCCCTTTTCCACTTCCACCGTCGTCCTCCGCCTCTACTCTTCCGAAAACCACCACCCTCCACCGTTGCAAAGTCCTTCTCCTCCGAGGAGTTCCCCGTCGACGAGACCTTCCTCCAGACCTTCGGCCCCAATAGCAAGGAATCCGAGGATGAAGCTCGAAAGCGCAACTGGATCGAACGCGGCTGGGCTCCCTGGGATGAAATCCTCACTCCCGAAGCCCAATTCGCGCGTCACAGTCTCAACGAAGGTGAAGAGGTTCCTCTCAGTTCGCCGGAGTCCATCGAAGCGTTCAGAATGTTGAACCCTAGGTACCGTAAGAAGAAAATTGAAGAAATGGGATTGACGGAAGAGGAGTATTTGGCGAAGCAGTTTGAAATCAAGGGAGAGATTCCGGAGCCGTTGGAGACCAAGTGGGCGGGACCACTGGTGGTGCGGTTAGTGCCTCCGCGTGATTGGCCTCCCCGAGGGTGGGAGGTCGATCGGAAGGAACTCGAGTTCATTCGAGAAGCACATAAGTTGCAGGCGAAGAGGGTCAAGTTAGAGGATATTGAAAATGGAGTTAGAACTGAGACTGATGATGTGTGTTTGGATCGGTATAAGATGTTTCTGAAGCAATACAATGAGTGGGTGGAAGCTAACAAGGACTTGTTGGAAGAGGAATCTTATAAGCTAGACCAAGATTATTACCCTGGTAGGAGGAAAAGAGGCAAGGACTACAAAGAGGGCATGTACGAGTTACCATTCTATTATCCTGGTCAAATTTGTGTGGGGAAGGTGACAACTTTGCATCTCTATCAAGGGGCATTTGTTGACATTGGCGGGGTATATGATGGGTGGGTTCCTATAAAGAACAATGATTGGTTTTGGATTCGCCATCATATAAATGTGGGTATGACCGTCATTGTTGAAATTACGGCAAAGCGAGATCCTTATCGCTTCCGATTCCCAATTGAACTCCGTTTTGTTGATCCAAATATAGATCATCTGATCTTTAACAGATTTGACTTCCCACCAATATTCCACCGCGAGGAAGATACTAATCTAGATGAAATGCAGCGTGACTGTGGAAGACCTCCTGTTCCTAGAAAAGATCCAGGAGACAAGCCAGTAGAAGAACCTCTATTTTCTAATCACCCGTACGTTGAAAAGTTGTGGCAGATCAATGTAGCTGAGCAAATGATTTTGAATGATATGGATCTTAATCCTGATAAATATAAAGGCAAAAAACTGTCAGACTTGGTTGACAGAGATGATTTTGATGAAGAAAAATCCGTTCAGCATACAAAAGTTCAGTATAAGAATGCTTTAGTGCCAAAAGTAACTTTGAAAACAAGTGTCAAAGAGCTTGACTTAGAGGCTGCACTTGCTGAGCGTGAGCACCATAAGAAACTATGGAAGGAAGCAAAGGACAGAGGTAAGGAGTACAAAATTACCACATTGAAGCGCAATATTGAGATGGATGAATATGATTTTATGCATTGGCGTAGATCATTTGAAGAAAGAGAAGCTTTGATTAGAGACATCAGCTGTCGCAAAACTCTTGGACTACCATTGGAAGAGCCAGGAAGGTATGTGGATGCTAGTTTTTTCGGTAAAGGCCAGTATGATCCTGAAAGTCCTCTATATCGTTATGACTATTGGGGAGAACCCAAGAATTCAGAAAAGAGCAGAAAAAAGAGGATGACAGATACTCATAACAAATCAATTGTGGGCAAGGGCACTGTTTGGTGTGAAATGCCGTATGAAGATAGCATCAAGCTTCAGGGCAAAGAATTCGATGAGTATATAAAGCAAGGTGAAGGTGATGAAGAAGAGGATGATGAGGATGATGATGACGACGATGGTTTTGACTTTAGTATTCTTGGCAATAATGATGTCGCAGATCAAATCCATGTTAATGGAACCGAGACTTCTAGATTGTCAGATGAAGGCGTGATTGAGAAATGA 2007 0.4425 MQVFPNSYLFTFPKPLNPPSPLFHFHRRPPPLLFRKPPPSTVAKSFSSEEFPVDETFLQTFGPNSKESEDEARKRNWIERGWAPWDEILTPEAQFARHSLNEGEEVPLSSPESIEAFRMLNPRYRKKKIEEMGLTEEEYLAKQFEIKGEIPEPLETKWAGPLVVRLVPPRDWPPRGWEVDRKELEFIREAHKLQAKRVKLEDIENGVRTETDDVCLDRYKMFLKQYNEWVEANKDLLEEESYKLDQDYYPGRRKRGKDYKEGMYELPFYYPGQICVGKVTTLHLYQGAFVDIGGVYDGWVPIKNNDWFWIRHHINVGMTVIVEITAKRDPYRFRFPIELRFVDPNIDHLIFNRFDFPPIFHREEDTNLDEMQRDCGRPPVPRKDPGDKPVEEPLFSNHPYVEKLWQINVAEQMILNDMDLNPDKYKGKKLSDLVDRDDFDEEKSVQHTKVQYKNALVPKVTLKTSVKELDLEAALAEREHHKKLWKEAKDRGKEYKITTLKRNIEMDEYDFMHWRRSFEEREALIRDISCRKTLGLPLEEPGRYVDASFFGKGQYDPESPLYRYDYWGEPKNSEKSRKKRMTDTHNKSIVGKGTVWCEMPYEDSIKLQGKEFDEYIKQGEGDEEEDDEDDDDDDGFDFSILGNNDVADQIHVNGTETSRLSDEGVIEK 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01911 668 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 10 41 649 IPR044967 GO:0000427|GO:0003723
Vifa2g01911 668 MobiDBLite consensus disorder prediction 370 392 - -
Vifa2g01911 668 MobiDBLite consensus disorder prediction 618 638 - -
Vifa2g01911 668 SUPERFAMILY Nucleic acid-binding proteins 268 327 IPR012340 -
Vifa2g01911 668 MobiDBLite consensus disorder prediction 646 660 - -
Vifa2g01911 668 MobiDBLite consensus disorder prediction 615 668 - -
Vifa2g01911 668 MobiDBLite consensus disorder prediction 370 391 - -
Vifa2g01911 668 ProSiteProfiles S1 domain profile. 272 340 IPR003029 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01911 Vifa-Chr2 495799034 495812447 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01911 - - gmx:100783002 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01911 2 495799034 495812447 Vifa2g01911 2 495799034 495812447 ECH