Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01908 ATGTCGAAGGACGAAGGAACCGTCGTTTCCGATCTGATCAACTTTCTCAACGCATCTCCAACTGCTTTCCACGCCGTCGACGAGGCCAAGAAACAGTTGCAAGCCGTCGGATACGAACAAATCTCGGAGAAGGAAGTTTGGGAACTAAAAGCCGGTCACAAATACTTCTTAACCAGAAACCATTCCACCATCGTCGCTTTCGCCGTTGGCAAAAGATATGTTGCTGGAAATGGATTCCATATAATTGGTGCTCACACCGATAGTCCTTGTTTGAAACTGAAACCGGTGTCAAAGGTGGTTAAGGGTGGAATATTGGAGGTTGGTGTTCAAACCTATGGAGGAGGTTTATGGTACACGTGGTTTGATCGGGATTTGACTGTGGCTGGGAGGGTTATCTTAAAAAGAGAAAATGCTGGCTCTGTTTCGTATTCGCATCGCCTTGTTAGAATTGAGGAACCTATAATGCGTGTCCCCACTTTGGCAATTCACTTAGACAGAGGTGTTAATGATGGATTCAAAGTAAACACGCAGACTCATCTTGTTCCCATTCTTGCAACTTCTCTAAAGGCAGAGGTTAATAAAGTGCCCTCTGAAAACGGTTCAGTTGAAAGTGGAAAGCAGAATGATGGAAAGAAAGAAAATGATAAAACAGGGTCTAGCAATGCAAAGCACCACCCTATACTTTTACAGTTGCTTGCAAGTAAACTTGAGTGTGAACCAGATGACATTTGTGATTTTGAATTGCAAGCTTGTGATACACAACCAAGCATAATTGCTGGAGCCGCCAAGGAGTTCGTATTTTCAGGACGACTTGATAACCTCTGCATGTCATTTTGCTCGTTGAAGGCATTAATAGATGCTACATCCTCTGACAGCAATCTTGAGGAAGAGCCTGGCATTAGAATGGTGGCTTTGTTTGACCATGAGGAATGTGGATCTAACTCTGCTCAAGGAGCTGGCTCTCCTGTAGTGCTAGATGTTTTATCGAGGATTACACATTCCTTCAGCCCAAATTCCAAGCTTCTCGAGAAAGCAGTACAGAAAAGCTTCCTTGTATCTGCTGATATGGCACATGCACTACACCCGAATTACATGGACAGGCATGAAGAAAACCATCAGCCTAAACTACATGGAGGACTTGTCATTAAGCAAAATGCAAACCAACGCTATGCAACCAATGCTGTCACATCCTTCATTTTTAGGGAGATAGCATCAAAACATAATCTTCCTGTTCAGGACTTTGTGGTGCGCAATGACATGGCCTGCGGTTCAACAATTGGTCCTATTCTCGCAAGTGGCATAGGTATTCGAACTATCGATGTTGGTGCACCGCAGTTGTCAATGCATAGCATCCGAGAAATGTGTGCTGTTGATGATGTGAAATACTCATATGAACATTTCAAGGCCTTTTTCCAGGAATTCTCTCTTCTCGATGCTAATATTGTTGTGGACATATAG 1458 0.4348 MSKDEGTVVSDLINFLNASPTAFHAVDEAKKQLQAVGYEQISEKEVWELKAGHKYFLTRNHSTIVAFAVGKRYVAGNGFHIIGAHTDSPCLKLKPVSKVVKGGILEVGVQTYGGGLWYTWFDRDLTVAGRVILKRENAGSVSYSHRLVRIEEPIMRVPTLAIHLDRGVNDGFKVNTQTHLVPILATSLKAEVNKVPSENGSVESGKQNDGKKENDKTGSSNAKHHPILLQLLASKLECEPDDICDFELQACDTQPSIIAGAAKEFVFSGRLDNLCMSFCSLKALIDATSSDSNLEEEPGIRMVALFDHEECGSNSAQGAGSPVVLDVLSRITHSFSPNSKLLEKAVQKSFLVSADMAHALHPNYMDRHEENHQPKLHGGLVIKQNANQRYATNAVTSFIFREIASKHNLPVQDFVVRNDMACGSTIGPILASGIGIRTIDVGAPQLSMHSIREMCAVDDVKYSYEHFKAFFQEFSLLDANIVVDI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01908 485 SUPERFAMILY Zn-dependent exopeptidases 9 472 - -
Vifa2g01908 485 Gene3D Aminopeptidase i, Domain 2 89 254 IPR023358 GO:0004177
Vifa2g01908 485 CDD M18_DAP 11 472 - -
Vifa2g01908 485 Gene3D Zn peptidases 12 470 - -
Vifa2g01908 485 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 112 132 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vifa2g01908 485 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 306 324 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vifa2g01908 485 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 349 365 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vifa2g01908 485 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 438 453 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vifa2g01908 485 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 79 95 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vifa2g01908 485 SUPERFAMILY Aminopeptidase/glucanase lid domain 91 249 - -
Vifa2g01908 485 PANTHER ASPARTYL AMINOPEPTIDASE 2 484 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vifa2g01908 485 FunFam Probable aspartyl aminopeptidase 244 471 - -
Vifa2g01908 485 MobiDBLite consensus disorder prediction 205 220 - -
Vifa2g01908 485 FunFam Aspartyl aminopeptidase 1 90 255 - -
Vifa2g01908 485 MobiDBLite consensus disorder prediction 195 221 - -
Vifa2g01908 485 Pfam Aminopeptidase I zinc metalloprotease (M18) 15 471 IPR001948 GO:0004177|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01908 Vifa-Chr2 495142007 495147306 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01908 K01267 - gmx:100781379 827.78