Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01894 ATGCTAGGTATAAAAATGAACTTGGTAATATTGTGCTTCTTCTTGATGAACTTAAGGATGAGTTTGGGTGATATTGGAGAGCAGCCACTTTCAAAGATTGCCATTCACAAAACCATTCTTGCACTCCACACTTCTGCCTCTATTACAGCTTCCCCTTTTCTGCTTGGAAATAAGGGTGAGGATGCAGAATGGGTGACAGTAGAGCTTGTGTCCCCTGAACCAGCCATTGATGATTGGGTTGGAGTTTTCTCTCCAGGAAACTTAAATTCATCAACATGTGCACCCAACCCAGGTGGTATTGGATGGGTAGAAACTCCATATATATGCACAGCCCCAATAAAGTATAAGTATGCCAACCATTCAAATCCAAACTACAAAAAGACAGGAAAAACTACTTTGAAGTTCCGATTGATCAATCAACGTTCAGATTTTTCCTTTGCGTTATTTTCAGGTGGATTATCCAATCCTCAACTTGTGGCAGTTTCCAGCAACTCCATCGCATTTGCAAATCCTAAAGCGCCTGTGTATCCCCGACTAGCTCATGGCAAATCTTGGAATGAAATGACAGTTACCTGGACAAGTGGATATGACATAGATGAAGCTGTACCCTTTGTGGAATGGGGTCCAAAGGGAGGAAGACAGATACAATCAGCTGCAGGAACATTGACATTTAATCGTAACAGCATGTGTGGTGAACCTGCGCGAACCGTGGGCTGGCGCGATCCTGGTTTTATACACACAAGTTTCCTTAAAGAACTTTGGCCAAATACGAGGTACACCTATAGGTTGGGACATTTTTTGTCTGACGGTTCTTATGTATGGAGCAAGAGGTATTCATTCAAGGGATCTCCATATCCTGGACAAAAATCATTGCAACGTGTAATCATATTTGGTGACATGGGAAAGGCTGAGCGTGACGGTTCAAATGAATATGCTAATTACCAACCTGGTTCACTTAACACCACAGACCAGCTCATCAAGGATTTAGACAACTTTGACATTGTTTTCCACATAGGAGATCTTCCATATGCAAATGGATACATCTCACAGTGGGACCAGTTCACAGCTCAAGTGCAAGAAATTTCTTCAACAGTTCCATATATGATAGCAAGTGGAAATCATGAACGTGATTGGCCAAACACTGGATCATTCTTCAACACTCCGGATTCTGGTGGAGAATGTGGAGTTCCTGCAGAAACCATGTACTATTACCCTGCTGAGAACAAAGCCAAATTCTGGTATGCAACAGATTACGGCATGTTTCGTTTCTGTATAGCAGACAGTGAGCATGACTGGAGAGAAGGATCAGAACAATACAAATTCATTGAGAATTGTCTTGCAACGGTAGATCGAAAACAACAACCATGGTTAATCTTTGCAGCACATCGCCCCCTCGGTTACTCTTCTAACTCTTGGTATGCCATGGAAGGGTCATTTGAAGAGCCCATGGGAAGGGAAAGTTTGCAAGGGCTATGGCAGAAGTACAAAGTAGACATTGCATTTTATGGTCATGTCCATAACTATGAAAGAGTCTGCCCCATTTATCAGAACCAATGTGTGAATAAGGAAAAATATCATTATTCTGGCACTGTGAATGGAACAATTCATGTGGTTGTTGGTGGAGGGGGGAGTCATTTATCAGACTTCACTGCATCACCTCCAGTTTGGAGTATTTTCAGGGATAGAGACTATGGTTTTGGAAAACTAACAGCATTCAATCACTCATATCTGTTGTTTGAGTATAAGAAAAGTAGTGATGGAAAGGTGTATGACTCTTTTACCATTTCTAGGGACTATAGAGATGTCTTAGCTTGTGTGCGTGATGGTTGTGAGAAAACCACCTTGGCAACCTGA 1854 0.4196 MLGIKMNLVILCFFLMNLRMSLGDIGEQPLSKIAIHKTILALHTSASITASPFLLGNKGEDAEWVTVELVSPEPAIDDWVGVFSPGNLNSSTCAPNPGGIGWVETPYICTAPIKYKYANHSNPNYKKTGKTTLKFRLINQRSDFSFALFSGGLSNPQLVAVSSNSIAFANPKAPVYPRLAHGKSWNEMTVTWTSGYDIDEAVPFVEWGPKGGRQIQSAAGTLTFNRNSMCGEPARTVGWRDPGFIHTSFLKELWPNTRYTYRLGHFLSDGSYVWSKRYSFKGSPYPGQKSLQRVIIFGDMGKAERDGSNEYANYQPGSLNTTDQLIKDLDNFDIVFHIGDLPYANGYISQWDQFTAQVQEISSTVPYMIASGNHERDWPNTGSFFNTPDSGGECGVPAETMYYYPAENKAKFWYATDYGMFRFCIADSEHDWREGSEQYKFIENCLATVDRKQQPWLIFAAHRPLGYSSNSWYAMEGSFEEPMGRESLQGLWQKYKVDIAFYGHVHNYERVCPIYQNQCVNKEKYHYSGTVNGTIHVVVGGGGSHLSDFTASPPVWSIFRDRDYGFGKLTAFNHSYLLFEYKKSSDGKVYDSFTISRDYRDVLACVRDGCEKTTLAT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01894 617 SUPERFAMILY Purple acid phosphatase, N-terminal domain 161 283 IPR008963 GO:0003993|GO:0046872
Vifa2g01894 617 SUPERFAMILY Metallo-dependent phosphatases 292 599 IPR029052 -
Vifa2g01894 617 Pfam Fn3-like domain from Purple Acid Phosphatase 48 170 IPR040974 -
Vifa2g01894 617 Pfam Purple acid Phosphatase, N-terminal domain 180 281 IPR015914 GO:0003993|GO:0046872
Vifa2g01894 617 CDD MPP_PAPs 292 597 IPR041792 -
Vifa2g01894 617 Gene3D - 288 601 IPR029052 -
Vifa2g01894 617 PANTHER PURPLE ACID PHOSPHATASE-RELATED 13 601 - -
Vifa2g01894 617 Pfam Iron/zinc purple acid phosphatase-like protein C 533 592 IPR025733 -
Vifa2g01894 617 Gene3D - 173 286 - -
Vifa2g01894 617 Pfam Calcineurin-like phosphoesterase 293 508 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01894 Vifa-Chr2 493873052 493877035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01894 44 595 Miscellaneous Gene Families AT1G13900 29.519 4.90e-60 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01894 K22390 - gmx:100775672 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01894 2 493873052 493877035 Vifa2g01894 2 493873052 493877035 ECH