Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01885 ATGGCTTTTCGCTCCTTCTTCTTCTCATTCCCTTCCACAACCCTCAAAAACCCTAACCACATCTTCTCCCTCCAATTCTCAACCTCTTTTCTAGTCACCAAAACCCCCAAAAAACTCAAGAAAAAACACAAACCCAAATCAAGCCCCCGAACCAATCCAATCCAAACCCAACCAAACCGCATTACCGAATTCGAACGAATCGTACAACGCGACACTCTCACCAGATTCGTAACAAGATCAAAGCAGTATCTCTCCAATCAACCCGAGCACGTTCTCCAACTCGACGACGCCGGTAAACTCCACCGCGAACTCGGTTTCCCCCGCGGCCGGAAAGTTTCCAGATCCATCCAGCAACATCCGCTTCTCTTCCAAACCTACCGCCACACCGATGACAAAATGTGGCTCGGATTCACCGATCTCATGGAAGAACTCCTCGCTGAGGAACAGTCCGTTATGGAATCAATGGAACTCGATCGCGTCGATAAGGTTCGTAAGCTTCTCATGATGTCAGCGAATCACCGTATTCCGCTTAGTAAATTGCATCACTGTAGAATCTTATTTGGTTTACCTGATGATTTTCGCGACCGCGTTGTGAAATACCCTAACTATTTCCGCGTTGTTGTAGATAACAACAATGACGGAAAGCATGTTCTTGAGTTGGTTAATTGGGATCCGCTTTTGGCGGTGAGTGCGCTTGAAAGAGAGTTTATTGTTAATGAAGAAGCTGCTAAGAGGAAGTTTCATTTTCCTGTGAAGCATGGGAAGGATTTGGATTTGGAGTTGGATGATAAGAGGAAGCTGAATTTGTTGAATGCGCTTCCGTTGGTGTCTCCTTATTCGGATGGTTCGAAATTGGATGTGTGGACTTTGGATGCTGAGAAATATAGAGTTGGATTGATTCATGAGTTTTTGAATTTGACGTTGGAGAAGAGAGCTTCGATTCATCATCTTGTTGAGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCATATGCTACTTAAGCAGCCGAGGGCGTTTTATTTGGCGGGAACTGAGATGAATTGGGTTGTGTTTTTGAAAGATGGTTATGATAGAAATGGTGTTTTGATTCATAAGGATCCTCAGGTGGTGTTCAATGAGAAGCTTTATAAGTATGCTCAGATACAGGAAATGGAACCTGATTCTGAATCTTCTGATGTTGGATTGGAAAATCAACATATCACTTGA 1212 0.4348 MAFRSFFFSFPSTTLKNPNHIFSLQFSTSFLVTKTPKKLKKKHKPKSSPRTNPIQTQPNRITEFERIVQRDTLTRFVTRSKQYLSNQPEHVLQLDDAGKLHRELGFPRGRKVSRSIQQHPLLFQTYRHTDDKMWLGFTDLMEELLAEEQSVMESMELDRVDKVRKLLMMSANHRIPLSKLHHCRILFGLPDDFRDRVVKYPNYFRVVVDNNNDGKHVLELVNWDPLLAVSALEREFIVNEEAAKRKFHFPVKHGKDLDLELDDKRKLNLLNALPLVSPYSDGSKLDVWTLDAEKYRVGLIHEFLNLTLEKRASIHHLVEFKEEFSLTKHTYHMLLKQPRAFYLAGTEMNWVVFLKDGYDRNGVLIHKDPQVVFNEKLYKYAQIQEMEPDSESSDVGLENQHIT 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01885 403 Pfam Plant organelle RNA recognition domain 60 383 IPR021099 GO:0003723
Vifa2g01885 403 MobiDBLite consensus disorder prediction 37 58 - -
Vifa2g01885 403 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 40 388 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01885 Vifa-Chr2 490882057 490883268 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01885 - - gmx:100813429 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01885 2 490882057 490883268 Vifa2g01885 2 490882057 490883268 ECH