Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01846 ATGGCTACTGAAGTATGTCACCACGCTATTGGGACTTTGCAGTCTCATTCTTACCTTAGTAATTTGAATCATAGCCAAAATCTCAGGAGCGGTTCGTTAAGATTGGCGACAAGCCAGAGGAATTGTTTTGTAATTCGGTCTTCAGCTTCTCATTCTCAGACATCGGTTGTTGATCCAGTGTTGGCCCCTTCAAGAAGCAACACTGGTGACAGTTCTAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACACGGTGAGTCGTTGTGGAATGAAAAGAATTTGTTCACAGGTTGTGTTGATGTACCACTTAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAAGATTAGTAACATTCCTGTTGATGTCATATTTACGTCTGCGTTGATTCGTGCACAAATGACAGCCATGCTTGCCATGACCCAACATCGCCGTAAGAAGGTGCCTGTTGTTTTGCACGACGAGAGTGAGCAAGCAAAAGCATGGAGTCAAGTTTTTAGCGAAGATACAAAAAAGCAGTCCATTCCAGTCACAACAGCTTGGCAACTAAATGAAAGAATGTATGGAGAACTACAGGGTCTCAATAAGCAAGAAACAGCAGACAGATACGGGAAAGAGCAAGTCCATGAGTGGCGCCGAAGCTACGACATACCTCCTCCCAATGGTGAAAGTTTGGAAATGTGCGCTGAAAGAGCAGTTGCCTATTTCAGAGACCGGATTGAACCCAAACTTTTATCTGGAAAGAATGTTATGATTGCAGCACACGGGAATTCATTGAGATCCATTATCATGTATCTCGACAAGTTAACTTCCCAGGAGGTCATTAGTTTAGAACTGTCAACAGGAATTCCAATGCTTTACATTTTCAAAGAGGGAAGATTCATCAGGAGGGGGAGTCCTACAGGACCAACTGAATCTGGAGTTTATGCCTATACCAAGCATTTAGCGCTTTACAGACAGAAGTTGGATGAGATGTTCCAATAA 993 0.427 MATEVCHHAIGTLQSHSYLSNLNHSQNLRSGSLRLATSQRNCFVIRSSASHSQTSVVDPVLAPSRSNTGDSSKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKKISNIPVDVIFTSALIRAQMTAMLAMTQHRRKKVPVVLHDESEQAKAWSQVFSEDTKKQSIPVTTAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDRIEPKLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYIFKEGRFIRRGSPTGPTESGVYAYTKHLALYRQKLDEMFQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01846 330 PANTHER PHOSPHOGLYCERATE MUTASE 70 316 IPR005952 GO:0006096|GO:0016868
Vifa2g01846 330 CDD HP_PGM_like 80 299 IPR013078 -
Vifa2g01846 330 Pfam Histidine phosphatase superfamily (branch 1) 80 157 IPR013078 -
Vifa2g01846 330 Pfam Histidine phosphatase superfamily (branch 1) 175 283 IPR013078 -
Vifa2g01846 330 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 77 304 IPR005952 GO:0006096|GO:0016868
Vifa2g01846 330 SUPERFAMILY Phosphoglycerate mutase-like 80 296 IPR029033 -
Vifa2g01846 330 Gene3D - 69 303 IPR029033 -
Vifa2g01846 330 SMART PGAM_5 79 265 IPR013078 -
Vifa2g01846 330 MobiDBLite consensus disorder prediction 56 75 - -
Vifa2g01846 330 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 82 91 IPR001345 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01846 Vifa-Chr2 479374150 479376024 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01846 K01834 - gmx:100802621 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01846 2 479374150 479376024 Vifa2g01846 2 479374150 479376024 ECH