Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01843 ATGATGTTAGGGAAAAGACCTCGTCCTCCAATGAAAAGAACAACAAGCATGTCAGAGATAACCTTCGATCTGAACACAATAACACCAGAAGATGATCCCAACAACAACCTCTTCACTCCTAACGGACCTGGTGTTGGTCCCTTCGCTCCGTATCCATCATATCCACCAATTTCTCCTGGAACCAACGGTTCAGATCAAACCAGGCTTTTAGCCACAGTTTCACCCAGAAACCCTAGAAGAAACTCATCTGATATGACTCAAACCCCTGATTTCTTACGTTCTTGCTTTCTATGTAAACGCCGTTTAGTACCCGGCCGTGACATCTACATGTACAAAGGAGACAGTGCTTTCTGCAGTTTAGAGTGTCGTCAACAGCAGATGAATCAAGATGAGAAGAAGGATAAGTGTTGTGTGGCATCAAAGAAACAAGTTGTTGTTGCGGCGGGTTCTAAGGTTACTACAAAGAGTGAAAAAACCGCGGTTGCCACAAGTTTGTAG 498 0.4418 MMLGKRPRPPMKRTTSMSEITFDLNTITPEDDPNNNLFTPNGPGVGPFAPYPSYPPISPGTNGSDQTRLLATVSPRNPRRNSSDMTQTPDFLRSCFLCKRRLVPGRDIYMYKGDSAFCSLECRQQQMNQDEKKDKCCVASKKQVVVAAGSKVTTKSEKTAVATSL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01843 165 ProSiteProfiles Zinc finger FLZ-type profile. 90 134 IPR007650 -
Vifa2g01843 165 PANTHER FCS-LIKE ZINC FINGER 5 1 152 - -
Vifa2g01843 165 MobiDBLite consensus disorder prediction 58 86 - -
Vifa2g01843 165 Pfam zinc-finger of the FCS-type, C2-C2 83 133 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01843 Vifa-Chr2 478320533 478321198 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01843 - - psat:127084181 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01843 2 478320533 478321198 Vifa2g01843 2 478320533 478321198 ECH