Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01841 ATGGCTAGCGCTGGGCATGGAAATGGACTCATAAATGGTGTGGTATCGAATAAGCACACTGCTACAATATCTGAAGTAGACGAATTCTGCAATGCCCTTGGAGGAAATAGGCCGATTCATAGTATATTGATTGCGAACAATGGAATGGCGGCTGTCAAGTTTATACGCAGTGTTAGGAGTTGGGCTTACGAGACGTTTGGCACGGAAAAGGCTATCTTGTTGGTTGCCATGGCTACTCCAGAAGATATGAGAATCAATGCAGAACATATCAGAATAGCTGATCAGTTTGTGGAAGTACCTGGTGGGACCAATAACAATAACTACGCCAATGTGCAGCTTATTCTAGAGATTGCCGAGATAACTCATGTTGATGCGGTATGGCCTGGTTGGGGTCATGCATCAGAGAATCCCGAGCTACCAGATGCATTAAAAGCAAAAGGAATTGTATTTCTTGGGCCTCCTGCAGTATCTATGGGGGCATTGGGAGATAAAATTGGTTCATCGTTGATCGCTCAAGCAGCCAATGTGCCAACCCTTCCATGGAGTGGTTCACATGTGAAAATTCCTCCTGAAAGCTCCTTGATTACTATTCCTGATGAAATCTACCGAGCAGCATGTGTTTATACAACAGAAGAAGCAATTGCAAGTTGTCAAGTTGTTGGATACCCTGCAATGATCAAGGCGTCTTGGGGTGGTGGTGGTAAAGGCATAAGAAAGGTTCATAATGATGATGAGGTAAGGGCATTGTTCAAGCAAGTTCAAGGTGAAGTTCCGGGATCACCTATATTTATAATGAAAGTTGCTTCCCAGAGCCGGCATCTTGAAGTCCAACTGATTTGTGATCAGTACGGAAATGTTGCAGCTTTACACAGCCGTGATTGCAGTGTTCAACGAAGGCATCAAAAGATTATTGAGGAGGGTCCGATTACTGTAGCACCCCCAGAAACGGTGAAAGAACTTGAACAAGCGGCTAGAAGATTAGCTATATCTGTAAATTATGTTGGGGCAGCTACAGTTGAGTATCTTTATAGCATGGAAACTGGCGAGTACTACTTTTTAGAGCTGAACCCCCGTCTACAGGTTGAGCATCCTGTTACTGAATGGATAGCTGAGATAAATCTGCCAGCAGCACAAGTTGCCGTTGGGATGGGTATCCCTCTCTGGCAAATTCCCGAGATTAGGCGTTTCTATGGGATGGAACATGGTGGAGGGAATGATGCTTGGAGGAAAACATCAGTTTTAGCTACCCCTTTTGATTTTGACAAAGCACAGTCTACAAAGCCAAAGGGTCATTGTGTGGCTGTGCGAGTGACTAGTGAGGACCCCGATGATGGTTTTAAGCCTACAGGCGGGAAAGTGCAGGAGCTCAGCTTTAAAAGCAAACCAAATGTTTGGGCTTACTTCTCTGTTAAGTCTGGAGGAGGAATCCATGAATTTTCAGATTCTCAATTTGGACATGTTTTTGCCTTTGGAGAATCGAGGGCTTTAGCAATTGCAAATATGGTTTTGGGGCTGAAGGAAATTCAAATTCGAGGAGAAATTCGTACTAACGTTGATTATACAATTGATCTTCTGAATGCATCAGACTACAGAGATAACAAAATTCACACTGGATGGCTGGATAGTAGAATTGCAATGCGGGTTAGAGCAGAGAGACCTCCTTGGTATCTGTCTGTTGTTGGAGGGGCACTCTATAAAGCTACTGCTAGTAGTGCTGCTTTGGTTTCAGACTATGTTGGCTATCTTGAGAAGGGGCAAATCCCTCCTAAGCACATATCTCTTGTCCATTCTCAAGTGTCCTTAAGCATTGAAGGAAGCAAATATACTATTGACATGATACGAGGAGGACCTGGGAGTTATAAACTGAAATTGAATCAATCAGAGATAGAAGCGGAGATTCATACTTTACGTGATGGAGGTTTGTTGATGCAGTTGGATGGAAACAGTCATGTAATATATGCAGAGGAAGAAGCAGCTGGAACTCGCCTTCTAATTGATGGAAGGACTTGCTTGCTTCAGAATGATCACGATCCATCAAAGTTAATTGGAGAGACTCCATGCAAGCTTCTGAGATATTTGGTTGCAGACGACAGTCACATTGATGCAGACACACCATATGCTGAAGTTGAGGCTGGTGAACTTATAGCAAGGCTTGATCTAGATGATCCTTCTGCTGTAAGAAAGGCAGAACCCTTCACTGGGAGCTTCCCAATCCTGGGCCCTCCTACAGCAATTTCAGGTAAAGTTCATCAGAAATGTGCGGCAAGCTTAAATGCTGCACGGATGATTCTTGCTGGCTACGAGCACAATATTGATGAAGTTGTGCAAAGTTTGCTCAATTGCCTTGACAGCCCTGAATTACCTTTCCTTCAATGGCAAGAATGCTTTGCAGTTCTGGCAACCCGTCTTCCTAAAGATCTAAGAATTGAGTTGGAAGCTAAATATAAGGAGTTCGAGATTAATTCAAGCTCCCAAAATATTGATTTCCCTGCCAAATTATTGAAGGGAATTCTTGAAGATCATCTTTTCTCCTGTGCTGATAATGAAAAAGGAGCCTTAGAAAGACTAGTTGAACCTCTGATGAGTCTTGTAAAGTCTTATGAGGGTGGAAGAGAGAGCCATGCCCATAAAATTGTACAATCTCTTTTCGAAGAGTATCTCTCAGTCGAAGAACTATTTAGTGATAATATACAGGCTGATGTAATTGAACGACTCCGTCTTCAATACAAGAAAGATTTGTTGAAGATTGTAGATATTGTGCTCTCTCATCAGGGTGTCAAGAGCAAAAATAAGCTGATACTGCGACTAATGGATAAACTGGTTTACCCTAATCCTGCTGCCTATAGGGATCAATTGATCCGATTCTCCCAACTCAATCATATTATTTATTCTGAGTTGGCTCTTAAGGCTAGTCAACTTCTTGAACAAACTAAACTGAGTGAACTTCGATCCAGCATTGCACGAAGTCTTTCTGAACTAGAAATGTTTACTGAGGATGGTGAAAATATTGATACTCCGAAGAGGAAGGGTGCCATTAATGACCGAATGGAGGACCTTGTGAGCGCTCCTTTGGCAGTTGAAGATGCTCTTGTGGGCTTATTTGATCACAGTGATAACACCCTTCAAAGGAGGGTTGTGGAAACTTATATACGTAGGCTTTACCAGCCGTATCTTGTCAAAGGCAGCATCAGGATGCAGTGGCACAGATCTGGCCTTATTGCTACGTGGGAGTTCTTAGAAGAATACGTTGAACGGAAGAACGGGGTTGAAGACAAAACACTGGTGGAGAAACATAGTGAGAAGAAATGGGGAGTGATGGTTGTAATTAAATCTCTTCAATTTTTGCCAGCAATTATCAGTGCTGCATTAAGGGAAGCAACCAATAACTTTCACGATGCACTTAAAAGTGGTTCTGTCGACTCAAATAAGCACGGTAATATGATGCATATTGGACTAGTGGGCATCAACAACCAAATGAGTTTACTTCAAGACAGTGGTGATGAAGATCAGGCTCAAGAAAGAATCAATAAGTTGGCCAAAATACTCAGAGAGCAGGAAGTAGGGTCCATAATACATGCTGCCGGTGTTGGAGATATTAGCTGTATCATACAGAGGGATGAAGGGCGTGCTCCAATGAGGCATTCCTTCCACTGGTCAGCAGAAAAGCTATATTATGAAGAGGAACCCTTGTTGCGGCATCTGGAACCTCCGCTATCCATTTATCTTGAATTGGACAAACTTAAAGGCTATGAGAATATACGCTATACACCATCCCGTGATCGTCAATGGCACCTCTACACTGTTGTGGATACCAAGCCACAACCAATTCAAAGAATGTTTCTTCGAACACTTCTCAGACAGCCAACCACAAATGAAGGATACTCTGCTTATCAAAGGGTAGATGCAGAAACGTCTCGTACCCAATTGGACATGTCCTTTACTTCAAGGAGCATTTTTAGGTCCTTAATGGGTGCAATGGAGGAGTTGGAACTTAACTCACATAATACCACCATCAAATCTGAACATGCTCATATGTACCTCTACGTCCTACGTGAGCAACAAGTAGATGATCTTGTCCACTATTCCAAAAAAATCAACATAGATGCCGGTCAAGAAGAAACAACAGTAGAGACAATCTTGGAAGAACTGGCACAGGAAATCCATTCCTCTGTTGGTGTAAGAATGCATAGATTAGGAGTTTTTGTATGGGAAGTGAAGCTCTGGATTACAGCATGTGGACAGGCAAATGGTGCTTGGAGGGTCATTGTAAACAATGTTACTGGTCATACATCCACTGTACATATATATCGAGAAATGGAGGATGCCACCACTCATAAAGTGGTTTACAGTTCAGTCACAGTAAAGGGTCCACTGCATGGTGTACTAGTGAACGAAAACTATCAACCTTTGGGAGTTATTGACCGAAAACGTCTCGCAGCAAGAAAGAGTAGCACCACATACTGCTATGATTTTCCCCTTGCGTTTCAAACATCCTTGGAACAGTCATGGTCAATTCAACAGACAGGAGTTCAAAGAGCCAAAGATAAGGATCTCTTAAAAGTAACTGAGCTTAAATTTTCAGAGAAAGAAGGTAGCTGGGGTACTTCTCTTGTTCCTGCAGAGTGTCCTCCTGGACTCAATGATGTTGGCATGGTAGCCTGGTTGATGGAAATGTGTACTCCTGAATTCCCATCTGGAAGGACAATATTGGTTGTTTCGAACGACGTTACATTCAAGGCTGGTTCTTTTGGCCCAAGGGAGGATGCCTTCTTTAGAGCAGTAACTGATCTTGCCTGTGCTAAGAAAATACCTTTAATTTACTTAGCAGCAAATTCTGGTGCCCGTTTAGGTGTAGCCGAGGAAGTCAAAACTTGTTTCAGAGTTGGTTGGTCTGAGGAATCTAAACCTGAGCATGGTTTTCAGTATGTATATTTAACACCTGAGGACTATGCTCAAATTGGATCATCAGTGATGGCACATGAATTAAAACTTGAAAGTGGAGAAACTAGATGGGTTATAGATACCATTGTTGGTAAAGAAGATGGACTGGGAGTTGAAAACTTGAGTGGCAGTGGGGCCATTGCCGGTGCCTATTCAAGGGCGTACAAGGAAACCTTTACATTGACATATGTGACTGGTAGGACTGTTGGAATCGGTGCTTATCTTGCTAGGCTTGGGATGAGGTGCATACAGAGGCTTGATCAGCCTATAATTCTTACCGGTTTTTCAGCATTAAACAAACTTCTTGGTAGGGAGGTGTACAGCTCTCACATGCAACTTGGTGGACCTAAAATCATGGCAACTAATGGAGTTGTTCATCTTACTGTTTCGGACGACCTTGAAGGTGTTTCTTCTATTTTGAAGTGGCTTAGCTACATTCCTTCTCATGTAGGTGGTGCACTTCCCATTGTAAAACCCCTCGATCCCCCAGAGAGAGAAGTGGAGTATTTACCGGAAAATTCATGTGATCCTCGTGCGGCCATATCTGGAACTCTGGATGTTAATGGAAAATGGCTTGGAGGAATTTTTGACAAGGACAGCTTTGTGGAGACACTAGAAGGATGGGCAAGGACAGTTGTTACGGGAAGGGCAAAGCTTGGAGGAATCCCTGTGGGAATTGTTGCAGTAGAAACACAAACGGTTATGCAAATAATACCTGCTGATCCTGGCCAGCTTGATTCTCACGAGAGGGTTGTTCCTCAAGCCGGGCAAGTGTGGTTTCCTGATTCTGCGACCAAGACGGCCCAAGCGATATTGGATTTCAACAGAGAAGAGCTCCCGCTTTTCATTCTCGCAAACTGGAGAGGCTTTTCAGGTGGGCAAAGGGACCTTTTTGAAGGAATTCTTCAGGCTGGTTCAACTATTGTCGAGAACCTTAGGACATACAAACAGCCCATATTTGTATACATCCCGATGATGGGTGAACTCCGTGGTGGGGCTTGGGTTGTTGTCGACAGTCGAATCAACTCAGACCACATTGAAATGTATGCCGAACGAACAGCTAAAGGTAACGTCCTTGAGCCAGAAGGAATGATTGAGATCAAATTTAGAACAAGAGAATTGTTGGAGTGTATGAGAAGACTGGATCAACAATTGATTACTCTGAAGGAAAAACTTTCAGAAGCCAAGAGTAACAAGGACTTTGCTACATATGATTCTGTGCAGCAACAGATTAGATTCCGCGAGAAACAACTTTTGCCTTTGTATACTCAAATAGCTACCAAATTTGCTGAGCTGCATGATACATCCTTAAGAATGGCTGCGAAGGGTGTAATCAGAGAAGTTCTTGATTGGCGTAACTCGCGTTCTGTCTTCTATCGGAGACTGCACAGAAGAATCGGTGAGCACTCACTGATTAACAGTGTGAGAGATGCTGCTGGTGACCAATTGTCACATGTATCTGCCATGAACTTGCTCAAAGACTGGTATCTGAATTCTGATATTGCCAAAGGTAGAGAAGAAGCCTGGTTAGACGACGAAGCATTCTTTAGATGGAGGGATGATCCTGCAAATTACGAGGATAAACTGAAGGAATTGCGCGTACAGAGACTGTTGCTTCAGTTGACAAATATTGGTGACTCGGCTCTTGATTTACAAGCTCTACCTCAAGGTCTTGCCGCACTTTTAAGCAAGTTGGAAGCATCAAGTCGCAATAAGTTGACTGATGAACTTCGCAAGGTACTAGGTTAG 6690 0.4314 MASAGHGNGLINGVVSNKHTATISEVDEFCNALGGNRPIHSILIANNGMAAVKFIRSVRSWAYETFGTEKAILLVAMATPEDMRINAEHIRIADQFVEVPGGTNNNNYANVQLILEIAEITHVDAVWPGWGHASENPELPDALKAKGIVFLGPPAVSMGALGDKIGSSLIAQAANVPTLPWSGSHVKIPPESSLITIPDEIYRAACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLICDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPPETVKELEQAARRLAISVNYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEINLPAAQVAVGMGIPLWQIPEIRRFYGMEHGGGNDAWRKTSVLATPFDFDKAQSTKPKGHCVAVRVTSEDPDDGFKPTGGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEIQIRGEIRTNVDYTIDLLNASDYRDNKIHTGWLDSRIAMRVRAERPPWYLSVVGGALYKATASSAALVSDYVGYLEKGQIPPKHISLVHSQVSLSIEGSKYTIDMIRGGPGSYKLKLNQSEIEAEIHTLRDGGLLMQLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLIGETPCKLLRYLVADDSHIDADTPYAEVEAGELIARLDLDDPSAVRKAEPFTGSFPILGPPTAISGKVHQKCAASLNAARMILAGYEHNIDEVVQSLLNCLDSPELPFLQWQECFAVLATRLPKDLRIELEAKYKEFEINSSSQNIDFPAKLLKGILEDHLFSCADNEKGALERLVEPLMSLVKSYEGGRESHAHKIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDLLKIVDIVLSHQGVKSKNKLILRLMDKLVYPNPAAYRDQLIRFSQLNHIIYSELALKASQLLEQTKLSELRSSIARSLSELEMFTEDGENIDTPKRKGAINDRMEDLVSAPLAVEDALVGLFDHSDNTLQRRVVETYIRRLYQPYLVKGSIRMQWHRSGLIATWEFLEEYVERKNGVEDKTLVEKHSEKKWGVMVVIKSLQFLPAIISAALREATNNFHDALKSGSVDSNKHGNMMHIGLVGINNQMSLLQDSGDEDQAQERINKLAKILREQEVGSIIHAAGVGDISCIIQRDEGRAPMRHSFHWSAEKLYYEEEPLLRHLEPPLSIYLELDKLKGYENIRYTPSRDRQWHLYTVVDTKPQPIQRMFLRTLLRQPTTNEGYSAYQRVDAETSRTQLDMSFTSRSIFRSLMGAMEELELNSHNTTIKSEHAHMYLYVLREQQVDDLVHYSKKINIDAGQEETTVETILEELAQEIHSSVGVRMHRLGVFVWEVKLWITACGQANGAWRVIVNNVTGHTSTVHIYREMEDATTHKVVYSSVTVKGPLHGVLVNENYQPLGVIDRKRLAARKSSTTYCYDFPLAFQTSLEQSWSIQQTGVQRAKDKDLLKVTELKFSEKEGSWGTSLVPAECPPGLNDVGMVAWLMEMCTPEFPSGRTILVVSNDVTFKAGSFGPREDAFFRAVTDLACAKKIPLIYLAANSGARLGVAEEVKTCFRVGWSEESKPEHGFQYVYLTPEDYAQIGSSVMAHELKLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSSILKWLSYIPSHVGGALPIVKPLDPPEREVEYLPENSCDPRAAISGTLDVNGKWLGGIFDKDSFVETLEGWARTVVTGRAKLGGIPVGIVAVETQTVMQIIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYIPMMGELRGGAWVVVDSRINSDHIEMYAERTAKGNVLEPEGMIEIKFRTRELLECMRRLDQQLITLKEKLSEAKSNKDFATYDSVQQQIRFREKQLLPLYTQIATKFAELHDTSLRMAAKGVIREVLDWRNSRSVFYRRLHRRIGEHSLINSVRDAAGDQLSHVSAMNLLKDWYLNSDIAKGREEAWLDDEAFFRWRDDPANYEDKLKELRVQRLLLQLTNIGDSALDLQALPQGLAALLSKLEASSRNKLTDELRKVLG 2229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01841 2229 Gene3D - 269 527 - -
Vifa2g01841 2229 Gene3D - 1467 1794 - -
Vifa2g01841 2229 Gene3D - 206 268 IPR013815 GO:0005524
Vifa2g01841 2229 SUPERFAMILY PreATP-grasp domain 18 160 IPR016185 -
Vifa2g01841 2229 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 400 - -
Vifa2g01841 2229 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1466 1805 IPR011762 -
Vifa2g01841 2229 Gene3D - 164 204 - -
Vifa2g01841 2229 Coils Coil 2025 2045 - -
Vifa2g01841 2229 ProSiteProfiles Biotin carboxylation domain profile. 38 545 IPR011764 -
Vifa2g01841 2229 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 710 2227 - -
Vifa2g01841 2229 Pfam Carboxyl transferase domain 1561 2113 IPR034733 -
Vifa2g01841 2229 FunFam acetyl-CoA carboxylase isoform X2 1799 2198 - -
Vifa2g01841 2229 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Vifa2g01841 2229 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1809 2124 IPR011763 GO:0016874
Vifa2g01841 2229 SUPERFAMILY ClpP/crotonase 1800 2189 IPR029045 -
Vifa2g01841 2229 Gene3D - 1799 2198 - -
Vifa2g01841 2229 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 388 IPR005479 GO:0005524
Vifa2g01841 2229 FunFam acetyl-CoA carboxylase isoform X2 12 163 - -
Vifa2g01841 2229 FunFam acetyl-CoA carboxylase isoform X1 192 267 - -
Vifa2g01841 2229 Pfam Acetyl-CoA carboxylase, central region 719 1459 IPR013537 GO:0003989|GO:0005524|GO:0006633
Vifa2g01841 2229 Gene3D - 10 163 - -
Vifa2g01841 2229 Pfam Biotin carboxylase C-terminal domain 435 541 IPR005482 -
Vifa2g01841 2229 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Vifa2g01841 2229 SUPERFAMILY ClpP/crotonase 1469 1795 IPR029045 -
Vifa2g01841 2229 ProSiteProfiles ATP-grasp fold profile. 191 383 IPR011761 GO:0005524|GO:0046872
Vifa2g01841 2229 Gene3D Biotin dependent carboxylase carboxyltransferase 1617 1681 - -
Vifa2g01841 2229 FunFam acetyl-CoA carboxylase 1-like 269 527 - -
Vifa2g01841 2229 SUPERFAMILY Rudiment single hybrid motif 429 542 IPR011054 -
Vifa2g01841 2229 SMART Biotin_carb_C_2 434 541 IPR005482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01841 Vifa-Chr2 477294889 477305007 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01841 4 2229 Acyl Lipid Metabolism Gene Families AT1G36160 79.071 0.0 3729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01841 K11262 - gmx:100778658 4055.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01841 2 477294889 477305007 Vifa2g01841 2 477294889 477305007 ECH