Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01832 ATGTTGGTTAAGGTAGAAGAAAATCAGCTTTTGTGGCATGCTGTTGATCCTCGGTCTCGAATATGGCAGAGACTACCTACTATGCCTAATGTTGTTGATGAAGAGGAATCTAGAAAGGGTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAAGGTATGAGAATTGCTGAAGTTATTAGAGGCTTTTTTGGACAGAAGAATGCATTTGATGAAATGCCGTTTTGTGGTTGTGCTATTGGAGCTGTTGGTGGATACCTCTATGTTTTAGGTGGATTCTCTAAAGCTTCGACTATGAGGTGCGTCTGGCGATTCGATCCAATACAAAATACGTGGAGTGAAGTGAGTTCTATGTCTACGGGTCGGGCATATTGTAAGACAGGAATCTTAAACAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTTCAGCTGGATTGCTACCTCTTCAATCTGCTGAAGTTTTTGATCCTTCCACAGGTACATGGTCAGACGTACCTAGTATGCCATTCTCAAGAGCTCAGGTCCTTCCCAACGCCTTCTTGGCCGACATGTTAAAGCCAATTGCCACAGGGTTGACACCATACATGGGAAGGTTATGTGTTCCGCAGAGTTTGTATTCATGGCCCTTCTTTGTCGATGTTGGTGGAGAAATCTATGATCCTGAAACAAACTCGTGGATAGAAATGCCAACTGGAATGGGCGAGGGTTGGCCTGCACGGCAAGCAGGTACAAAATTAAGCGTCGTGGTGGATGGCAAATTATATGCTTTTGATCCTTCTAATACTATGGACAGTGGAAGGATCAAGGTATATGATCAAGGAGAAGATGCTTGGAAAGTTGTTATTGGAAAAGTCCCTATATACGGTTCTGATGATTCGGAATCTCCTTATCTACTTGCTGGTTTCCATGGAAAGCTTCATGTCATTACAAAAGACAGCAATCATAATATTTCTGTTCTGCAAGCTGAGCTGTGCAATAATTTGGACTCTTCACCATCGTCGCCCTCCTCGACTCTGTCACAAAGTTCCGTGCATGAATTTGTGGACCCACCAGTCGAGACAGATGCCGTTGTTTGGAAAATGATTGCAAGTAGGTGTTTGGGACAGGCTGAACTAGTTAGTTGCCAAGTTATTGACATGTAG 1143 0.4357 MLVKVEENQLLWHAVDPRSRIWQRLPTMPNVVDEEESRKGSSRLWMWNMVEGMRIAEVIRGFFGQKNAFDEMPFCGCAIGAVGGYLYVLGGFSKASTMRCVWRFDPIQNTWSEVSSMSTGRAYCKTGILNNKLYVVGGVSQGSAGLLPLQSAEVFDPSTGTWSDVPSMPFSRAQVLPNAFLADMLKPIATGLTPYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWIEMPTGMGEGWPARQAGTKLSVVVDGKLYAFDPSNTMDSGRIKVYDQGEDAWKVVIGKVPIYGSDDSESPYLLAGFHGKLHVITKDSNHNISVLQAELCNNLDSSPSSPSSTLSQSSVHEFVDPPVETDAVVWKMIASRCLGQAELVSCQVIDM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01832 380 Pfam Kelch motif 73 118 IPR006652 GO:0005515
Vifa2g01832 380 Pfam Kelch motif 121 169 IPR006652 GO:0005515
Vifa2g01832 380 SMART kelc_smart 85 131 IPR006652 GO:0005515
Vifa2g01832 380 SMART kelc_smart 132 178 IPR006652 GO:0005515
Vifa2g01832 380 Gene3D - 11 287 IPR015915 GO:0005515
Vifa2g01832 380 SUPERFAMILY Kelch motif 9 312 IPR015915 GO:0005515
Vifa2g01832 380 PANTHER OS02G0202900 PROTEIN 8 378 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01832 Vifa-Chr2 474363144 474364286 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01832 - - gmx:100806691 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01832 2 474363144 474364286 Vifa2g01832 2 474363144 474364286 ECH