Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01829 ATGTCGAGAGTTACTAAGTGGAAGATTGAGAAAACAAAAGTAAAGGTGGTTTTTCGACTCCAATTCCATGCTACACATATTCCACAACCTGGATGGGATAAACTGTTTATCTCTTTCATCCCTGCTGACACTGGGAAGGCTACATCAAAAACAACCAAAGCAAATGTGAGAAACGGAACTTGCAAGTGGGCAGATCCAATTTATGAAACTACAAGACTCCTCCAAGACATTAAAACAAGACAATATGAAGAGAAGCTTTACAAGCTTGTTGTGGGGATGGGCTCTTCACGATCTAGCATCCTTGGCGAGGCCAACATAAATCTGGCTGATTTCGTTGATGCATTGAAGCCTACAGCTGTTGCTTTGCCTCTTAACAGAAGTGAGCCTGGAGTCACACTACATGTTGCAGTGCAGCTTCTCACTTCCAAAACCGGTTTTAGAGAATTTGAACAACAGAGGGAACTCAGAGAGAAAGGTCTACAGACTACCTCTGACCAAGGTACTCATGATGGATCTGCTGATAGCAAAGAGTCATCTCCTGAGAAGAATGTCAATAATCACATTAACAAGGCCAATTCAAGAGTGAAATTGAAAAGGGAACCAAAATATCTTCGCCGTACTTCTTCACTTGAAGGAGAAGCAGGGTTAAATGAAGAGTACGCTGACTCAGCTGCTGGGTTTGATGGCTCTTCTACTACTTCTGAAAGTGTAAATACTGAGAAGCATGATATCTGCAGTACACATGAAGTGGACAGCCTTAAAAGCGCAGTCTCTGGTGATTTAGGTGCACTATCCCTCGGTCAAAGTCCTCAGCGAGAGAAAGGAGAAGCACCTAACAATCAATTTCCGCCACAGGACAATGCTTGGGCTCATGGTTGGAGCATAGACTATTCAGCTACCAATAATTTGGTTGCTGCTTCTGAAGACTTTAGCAGTAGCAGTCTTAACGGAAGTTTAGAAGCAGTTGAGTCATCTATTCTTGATCTTAAACTGAAGGTAAACTGTTTGCAAAATCATTCTGATGAAATAGGTGCTGAAACAAAACTTTTCTCTGAGCAAATTGTTGCTGAGATATCATCAGGAGAAGAGCTAGCAAGAGAGGTCGCCATACTAAAATCAGAATCTTCAAAGTTTAAAGATGAATTTGAGCAGCTTAAAAGTTCTAAGCTAAACTTATCATTTGCTCGTAATGAACCTACTGAGACGGATAGGGATACATTACTCCACAATTTACAGTTTAAATGGCATAAGGGGCTTTTGCTCATGGAAGATAAGTTGAGAGATATTCAGAAGGTATCTATGGGATTTCCTGAAAGGGATTTTCGGTTCTTTAACCTGGAGTTGGAGAGAGTGGTTGAGATTTTGCTGGATCTAAAACAAGAATCTAGTGATCCAATTTCAGGGACTGAAGTTGTCAACGGAAGAGAGAACGAGAAAATGGATTTACATATGGATGGGCAACTTTTAACAGATATTGGGTCCGATGCAGCTTTATTTCAACCTGAGAGCATGACTCGTTATCTCACCATACCCGGCCTTGTGTCTCATGAGTTTGATTCTGTAGATCCCACCCTTGCTATGAAGGAGAAAATTTTCGAACTTCTAAGGGAGCTTGACGAGTCCAAAACTGAAAGGGAAGGATTTGTGGGGAAAATGGACCAGATGGAGTGCTACTATGAAGCTCTTATTCAGGAACTTGAGCTGAGTCAAAGGCAGATGATGGCCGAGTTGCAAAATCTCAGAAATGAACATTCAACTTGCCTATATGCAATTTCCGCTGGTAAGACCGAGATGGAGAAAATGCACCAAAATATGAATGAACAGATAATGAAATTTTCGGAAGATAAGCGCATTTTGGAATCTCTCAACAGCGAGTTTGAAAGAAGGGCTTTGTCTGCAGAAGCAGCCCTTAAAAGGGCTAGATTGAACTATTCTATTGCTGTTGGTCAACTGCAAAAAGATCTCGAACTTCTTTCTTGCCAGGTTCTTTCAATGCATGAGACAAACGAGAATCTCATAAACCAGACCCTTTCTGATTCTTCACTTTCAAACACTGATGGTTTCCCAGAACCAGTGAATTGTACTAAAAGTTCAGAAGGTCATGCTTCTAATCAATTGCTACGTCAAAATCACAGTTCTTCCTTTCACAAACATTTGGGTGAAGACATTTTACTAAGTGATTTGAAAAGATCACTTCAATATCAAGAGGGGTTATACAAGCAGGTTGAAGAAGAAATCTGCCAGATGCATTTTGTGAATATATACTCAGATGTGTTTTCGAAGGCTCTGCAAGAAACATTGTTTGAAGCTAGTCTTAACATTCAGGTCATGAATAATGAAAATTTTCAACTCTCTAGACAGCTGGAGCTTATAAATCAATCGAATGACTTACTGGTATTGAGGTTGCAGAATGCTACGAATGATATCCTCTCGTTAAAGGAGTACAAAGAGCTTTGCATAGCGAAGTACAATGATCTTACTCACCAGAACCAAATTTTAGAAGCAAATTTACAAAATCTTTCTCATGAAAACAATCTTCTTACTCAGAAAAGTAATGAGTTGGAAGTCCTTCTGACAGATTATAGAAGTTATAAAAGCCAATACGTTGCATGCAGTGCAGAAAATTCAGAGTTGAAGAGCTTATTGAAAAAAGAGAGCCTAGAAAATTACCAACTTCATGATGAAATATCAATTTTGCAGGAAGAGTTAAAATCTTTCAGAGCTAAATTTGACGAGCTTGATTCTATGAAGAATGATCTGCAAAACAAAGTCAACTTTTTGTCTAGTAAGTTGCAGGAATTGGTGGCATCATATGATGATAGACACACTGAACTTTCTCTTTGTAGTTCTGCTTGCTTGGATTCAGAATGTAAAGACTTGGAAGGCCTGTTATTGCAACTAGAAGAGCAGCAACGTAATGCTTTTGATAGGATCCTGGTACTCATTGAAGAGAAGAAAAATTTAGCGAGTGAAAACCATATGGTTCAAGTATCTTTAAACACAGCAGAATCAGATGCTCTAGTAATGAAACAAAAGTTTGAGTGTGATTTTCAGCAGATGGTAAGTAAGATAAGTGTGTCGGGTATCCAGTTGCAGAAACTTGAGTCAGATTTTGAGGTGTTTGTTGACAGGATCAGTGCCAGTCTTAAATCTGAAGAAATATACTCTCAGCAGCACAATGAATTGTTTTCCAGTTTTGATCATTTGGAAGCTGACCTTCAGCAACTTAATTCCAGAAATCACGATCTTACTCAAGAAATTGTAAATCTAGGTACTTTATCTAGTGACCTTGAAATGTGTAAGCTGACCTTAGCAACAATTACCGAGGAGAAGAAAACTTTGGTGTTGTCTTTACAGGACAAAACAGAAGAATCTGCCCAGTTTTCATCTGAGGTTAGTCTTTTGAAAAACAACTTGTCTTCTCTGCACAATCAGTTGCATGATGAAAAAATCTTCAGAGAAAAATTGGAGAAAACGGTTATTGATCTTACCACAGAGTTGAATGAAAAACAACACCAGCTGCAGGATTCTGGTATGAACAGACAAGAGCTGGTCCATCTCAAGCAACTGGTCACAGATGTAGAAATTGAGAAATCAAGAATTTCAGATCTTCTACACATGGTTCAAGTATCTTTAAACACAGCAGAATCAGATGCTCTAGTCATGAAACAGAATTACGAGTGTGATTTACAGCAGATGGCAAGTAAAATAAGTAGGTCTGGTATCCAGTTGCAGAAACTTGAGTCAGATTTTGAAGCGTCTGTTGACAGGATCAGTGCCGGTCTTAAATCTGAAGAAATACACTCTCAGCAGCACAATGAATTGTTTTCCAGTTTTGATCATTTGGAAGCTGAGCTTCAGCAACTTAATTCCAGAAATCACGATCTTACTCAAGAAATTGTTAAGCTAGGTATTTTATCTAGTGACCTTGAAATGTGTAAGCTGACCTTAGCAACAATCACAGAGGAGAAGAAAGCTTTGGAGTTGTCTTTACAGGACAAAACAGAAGAATCAGCCCAGTTTTCATCTGAGGTTAATTTTTTGAAAAGCAACTTGTCCTCTCTGCACAATCAGTTGCATGATGAAAAAATCTTCAGAGAAAAATTGGAGAAAACGGTTACAGATCTTACCACAGAATTAAATGAAAAGCAACACCAGCTGCAGGATTCTGATATGAGTAGACAAGAGCTGGTTCATCTCAAACAACTGATCACAGATGTAGAATTTGAGAAATCAAGAATTTCAGATCTTCTACAGATATCTGAGAAACGTCTTGAAGATGCTTTAGAGGAATCCTCTTCTATTAGTTGTCTTGAAACCCACTTATCCGAAGTGCATGGATTTTCAATTGCTACAGATGTTGTTATGACCTTTACCAGAGCTCAGTTTGAGGGTCATGTAGAGGAAGTTACTGAGAAGCTTCATTCTGCTTGCAGACAAGTTGATGTGCTTTGTGAAAAGAATCTTGGTGTAGAAGCTGAATTGAATGCCTGTCTTTGTAGAGAATTGAATTGCATGGAAGAAAATATGACATTGTCCACGAGTCTTGACTACCTAAAGTCTGAGTTAGCAGTGTATACTGCTCAGTGTAGAGCACTAATCGATCAAAATAGTGTAACAATATCTGAACTTAAGGAACACAAGAGTAGGACAGAAAATGTCAGCAATTCTTCTTACTTGCGTGATAGCGAGTCTCGGCTTGAGGTTGTAAGGTTGGAGCAATTGTTGGAAAGTGTTTGTAGAGATGGGGCAGGACTGTTTTTATCAAATGTAGAAGCTGAAGTCAAATGTATAGTTCTCCAAGGAAATTTGAATGAACTGAAAACTGCAATTACTACCCTGAAACGATCAGACAATGAACTGATAAGGCTGCAGGACCAATGTAATGAGCTTACGAGGAGGCTTTCTGAACAGGTTCTTAAGACAGAGGAGTTCAAGAATTTGTCTATTCATTTGAAGGAACTGAAAGACAAAGCTGAAACTGAGTGTCTTAATGCTCGTGACAGAAGAGGAAATGAAGGACCACCGACCGCTATGCAGGAGTCATTGAGAATTGCATTTATCAAAGAACAATATGAAACTAAGTTGCAAGAACTGAAACAACAACTGTCTTTGTCAAAAAAACATAGTGAGGAAATGCTGTGGAAACTACAACATGCAAGTGAAGAAACTGAGAATAGAAAAAAGTCTGAAGCTTCTCAAATAAAAATAAATGAAGATTTGGGAATGAAGATCTTGGAGTTGGAGGCTGAGTTACAGGCTGTAATATCTGACAAACGCAATTTGCTAAATGCTTATGACCTGTTAAAGGCTGAAAAGGAGTGCTCAGTGATATCCCTTGAATGCTGTAAGCAAGAAAAACAAGAACTTGAAGCTTCTCTTCTGAAATGCAGTGAGGAGAAGTCCAAAATTGAAGCAGAGCTTACCCTGGTGAAGGGATCAATTGAGACTTTGAAATCTAGTGCGGATGTTCTGAATGAGGGCAATGGCACATTGTCTTCATTAAATCCTCAAGAAAAATCAACGCCTGCAGCTCTCAGTCACGAACCAGAGAGTGCAAATTCAATCCTCAGCGGGCAACCTGAGGATCCTCATGCATCTAGAGTTACAAATGGATGCCAAATTCTCGGAACTGAAGAGGACTTGCAAAAAAACGAAGACAACAAGCACCGGGCTTTATCTGAAAGTTTGAAATCTAGTATTGACCACCTGAATATGGAGTTAGAGAGGATGAAAAACGATAACATGCTTCCTACAGAAGATGGTCAAAACCATGAGTCAAGTTTTCCAGGTCTGCACAGAGAATTGACACAGTTACATGAGGCCAATCAAGAGTTAGGAAACATGTTCCCCGTGTTCAATAAAATCTCGGTCAGTGGTAATGCATTAGAAAGGGTGCTTGCTTTGGAGATTGAGCTTGCTGAAGCATTGCAAACCAAGAAGAAGTCAAGCCTCAAATTTCAGAGTTCTTTCTCGAAGCAACACAGTGACGACGAAGCAGTATTCAGAAGTTTCAGGGATATCAATGAGCTAATTAAAGATATGTTAGAACTAAAGACACGACATTCTTCCATGGAAACAGAACTGAAAGAGATGCATGACCGTTACTCTCAATTAAGTCTGCAGTTTGCAGAAGTTGAAGGTGAGAGACAAAAACTCATGATGACTCTTAAGAACATTCGAGTATCCAAGAAGGCTCCAAATTCTTCAACCTACTTCAGAGACCATTCCTTATCGCCGCACTAG 6246 0.3924 MSRVTKWKIEKTKVKVVFRLQFHATHIPQPGWDKLFISFIPADTGKATSKTTKANVRNGTCKWADPIYETTRLLQDIKTRQYEEKLYKLVVGMGSSRSSILGEANINLADFVDALKPTAVALPLNRSEPGVTLHVAVQLLTSKTGFREFEQQRELREKGLQTTSDQGTHDGSADSKESSPEKNVNNHINKANSRVKLKREPKYLRRTSSLEGEAGLNEEYADSAAGFDGSSTTSESVNTEKHDICSTHEVDSLKSAVSGDLGALSLGQSPQREKGEAPNNQFPPQDNAWAHGWSIDYSATNNLVAASEDFSSSSLNGSLEAVESSILDLKLKVNCLQNHSDEIGAETKLFSEQIVAEISSGEELAREVAILKSESSKFKDEFEQLKSSKLNLSFARNEPTETDRDTLLHNLQFKWHKGLLLMEDKLRDIQKVSMGFPERDFRFFNLELERVVEILLDLKQESSDPISGTEVVNGRENEKMDLHMDGQLLTDIGSDAALFQPESMTRYLTIPGLVSHEFDSVDPTLAMKEKIFELLRELDESKTEREGFVGKMDQMECYYEALIQELELSQRQMMAELQNLRNEHSTCLYAISAGKTEMEKMHQNMNEQIMKFSEDKRILESLNSEFERRALSAEAALKRARLNYSIAVGQLQKDLELLSCQVLSMHETNENLINQTLSDSSLSNTDGFPEPVNCTKSSEGHASNQLLRQNHSSSFHKHLGEDILLSDLKRSLQYQEGLYKQVEEEICQMHFVNIYSDVFSKALQETLFEASLNIQVMNNENFQLSRQLELINQSNDLLVLRLQNATNDILSLKEYKELCIAKYNDLTHQNQILEANLQNLSHENNLLTQKSNELEVLLTDYRSYKSQYVACSAENSELKSLLKKESLENYQLHDEISILQEELKSFRAKFDELDSMKNDLQNKVNFLSSKLQELVASYDDRHTELSLCSSACLDSECKDLEGLLLQLEEQQRNAFDRILVLIEEKKNLASENHMVQVSLNTAESDALVMKQKFECDFQQMVSKISVSGIQLQKLESDFEVFVDRISASLKSEEIYSQQHNELFSSFDHLEADLQQLNSRNHDLTQEIVNLGTLSSDLEMCKLTLATITEEKKTLVLSLQDKTEESAQFSSEVSLLKNNLSSLHNQLHDEKIFREKLEKTVIDLTTELNEKQHQLQDSGMNRQELVHLKQLVTDVEIEKSRISDLLHMVQVSLNTAESDALVMKQNYECDLQQMASKISRSGIQLQKLESDFEASVDRISAGLKSEEIHSQQHNELFSSFDHLEAELQQLNSRNHDLTQEIVKLGILSSDLEMCKLTLATITEEKKALELSLQDKTEESAQFSSEVNFLKSNLSSLHNQLHDEKIFREKLEKTVTDLTTELNEKQHQLQDSDMSRQELVHLKQLITDVEFEKSRISDLLQISEKRLEDALEESSSISCLETHLSEVHGFSIATDVVMTFTRAQFEGHVEEVTEKLHSACRQVDVLCEKNLGVEAELNACLCRELNCMEENMTLSTSLDYLKSELAVYTAQCRALIDQNSVTISELKEHKSRTENVSNSSYLRDSESRLEVVRLEQLLESVCRDGAGLFLSNVEAEVKCIVLQGNLNELKTAITTLKRSDNELIRLQDQCNELTRRLSEQVLKTEEFKNLSIHLKELKDKAETECLNARDRRGNEGPPTAMQESLRIAFIKEQYETKLQELKQQLSLSKKHSEEMLWKLQHASEETENRKKSEASQIKINEDLGMKILELEAELQAVISDKRNLLNAYDLLKAEKECSVISLECCKQEKQELEASLLKCSEEKSKIEAELTLVKGSIETLKSSADVLNEGNGTLSSLNPQEKSTPAALSHEPESANSILSGQPEDPHASRVTNGCQILGTEEDLQKNEDNKHRALSESLKSSIDHLNMELERMKNDNMLPTEDGQNHESSFPGLHRELTQLHEANQELGNMFPVFNKISVSGNALERVLALEIELAEALQTKKKSSLKFQSSFSKQHSDDEAVFRSFRDINELIKDMLELKTRHSSMETELKEMHDRYSQLSLQFAEVEGERQKLMMTLKNIRVSKKAPNSSTYFRDHSLSPH 2081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01829 2081 MobiDBLite consensus disorder prediction 272 287 - -
Vifa2g01829 2081 MobiDBLite consensus disorder prediction 158 241 - -
Vifa2g01829 2081 Coils Coil 896 937 - -
Vifa2g01829 2081 Coils Coil 2008 2035 - -
Vifa2g01829 2081 MobiDBLite consensus disorder prediction 193 207 - -
Vifa2g01829 2081 Coils Coil 823 857 - -
Vifa2g01829 2081 Coils Coil 1066 1093 - -
Vifa2g01829 2081 Coils Coil 1317 1337 - -
Vifa2g01829 2081 Coils Coil 552 583 - -
Vifa2g01829 2081 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 1 977 - -
Vifa2g01829 2081 Coils Coil 1153 1173 - -
Vifa2g01829 2081 MobiDBLite consensus disorder prediction 1829 1869 - -
Vifa2g01829 2081 Coils Coil 1780 1807 - -
Vifa2g01829 2081 Coils Coil 595 615 - -
Vifa2g01829 2081 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Vifa2g01829 2081 MobiDBLite consensus disorder prediction 262 288 - -
Vifa2g01829 2081 Coils Coil 725 745 - -
Vifa2g01829 2081 MobiDBLite consensus disorder prediction 226 240 - -
Vifa2g01829 2081 Coils Coil 1607 1641 - -
Vifa2g01829 2081 Coils Coil 1272 1299 - -
Vifa2g01829 2081 Coils Coil 1894 1914 - -
Vifa2g01829 2081 Coils Coil 1366 1386 - -
Vifa2g01829 2081 Coils Coil 623 643 - -
Vifa2g01829 2081 Coils Coil 1745 1765 - -
Vifa2g01829 2081 Coils Coil 1411 1431 - -
Vifa2g01829 2081 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 140 IPR019448 -
Vifa2g01829 2081 Coils Coil 1689 1709 - -
Vifa2g01829 2081 Coils Coil 950 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01829 Vifa-Chr2 473832022 473840911 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01829 - - lang:109328122 2606.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01829 2 473832022 473840911 Vifa2g01829 2 473832022 473840911 ECH