Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01823 ATGAGCAATTTGAGAACCCTATGCAGAACTCAAACAGTATTCTCCTTTATTAATTGTACACACCAATTTCGATTCAGAGCTTCGTTTTGGAACCCTAATTGCAAACCCCTTTTGCAATCACCTTGGTTCTACTCTACATGGCTCGTTTCTTCGGATTCCACCACACCCATGCCCCGGTTTCGTCTCAATCAGAAGCGAACTGTGGCGAAAGCAACCAATTGGGGTCAACAAAAGTCCCCATATGAAACTCTTGAATTGGAAGGAGATGCCGACGACGAGAAGATAAAGGTTGCTTATAGACGTTTGGCCAAGTTTTATCATCCAGATGTCTATGATGGAAGAGGAACACTCGAGGAAGGTGAAACAGCAGAAGCTAGGTTCATCAAGATTCAAGCTGCTTATGAGTTGCTCACAGATGCAGAGAAGCGAAGACAATATGACATGGATAATCGAGTCAACCCTATGAAGGCATCTCAAGCATGGATGGAGTGGCTTATGAAAAAACGAAAAGCTTTTAGTCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAACGCGAGTTGAATGTTCGCGTACGTCAACTTTCTCGCTCAAAGATTGATCCAGATGAAGCTAGAAAGATTCTGGCAAGAGAAAAGAAGGCTTCAGCTGAACATTTCAGCAGTACCCTTAAAAGGCACACACTTATACTGAAGAAGAGAGATCTAATGCGGAAAAAAGCTGACGAAGAAATGAAGAAGACTATTAGCCAGCTCTTAGCTGCAGAAGGGCTTGAGCTTGATAATAGTGACGAGGAATTATAG 813 0.4354 MSNLRTLCRTQTVFSFINCTHQFRFRASFWNPNCKPLLQSPWFYSTWLVSSDSTTPMPRFRLNQKRTVAKATNWGQQKSPYETLELEGDADDEKIKVAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLTDAEKRRQYDMDNRVNPMKASQAWMEWLMKKRKAFSQRGDMAIAAWAEQQQRELNVRVRQLSRSKIDPDEARKILAREKKASAEHFSSTLKRHTLILKKRDLMRKKADEEMKKTISQLLAAEGLELDNSDEEL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01823 270 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Vifa2g01823 270 Gene3D DnaJ domain 64 167 IPR036869 -
Vifa2g01823 270 SMART dnaj_3 78 142 IPR001623 -
Vifa2g01823 270 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Vifa2g01823 270 SUPERFAMILY Chaperone J-domain 48 146 IPR036869 -
Vifa2g01823 270 Pfam DnaJ domain 80 147 IPR001623 -
Vifa2g01823 270 CDD DnaJ 80 139 IPR001623 -
Vifa2g01823 270 FunFam Chaperone protein dnaJ 65 170 - -
Vifa2g01823 270 PRINTS DnaJ domain signature 81 99 IPR001623 -
Vifa2g01823 270 PRINTS DnaJ domain signature 122 142 IPR001623 -
Vifa2g01823 270 PRINTS DnaJ domain signature 168 187 IPR001623 -
Vifa2g01823 270 PRINTS DnaJ domain signature 99 114 IPR001623 -
Vifa2g01823 270 PANTHER CO-CHAPERONE PROTEIN DJLA 56 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01823 Vifa-Chr2 473346518 473347818 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01823 - - gmx:100808285 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01823 2 473346518 473347818 Vifa2g01823 2 473346518 473347818 ECH