Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01817 ATGAAGACTCGTGCATCTACCAAAATCTCTGCTAAATGGATTCCAATTTTCTCTGTCTTTTCCTTCCTTATTGGCATGCTTATCACAAACAGGGTGTGGGAGCAACCTGAATCAAATGGTTTGATAATTTCTAAGCATCAGCGTGATCAACAAGAACTTCAATTGATCTCAGAAGATTGTTCTAACAAAAAGAAGCAGGAAAATCCTAAGGATGAAATGAATGAATTGTATAAAACCCATGAAGCTATTCAGGCTCTAGATAAACAAGTTTCTATGTTGCAAATGGAATTAGCAGCTGCTAGGAGTTCTCGTGAAAAGAACTCAACTGTCTCGGCCACCGGTTCCAGGGAAGGTGCTTCCAAGAAGAAGAAGGCATTTGTAGTGATAGGTATAAACACAGCTTTCAGTAGCAGGAAGCGGCGTGATTCGGTTAGAGAAACTTGGATGCCTCAAGGCGAACAACTTCTTCAATTGGAACGAGAGAAAGGAATCGTCATCAGATTCATGATTGGCCATAGTGCAACTTCCAACAGCATTCTAGATCGAGCTATTGATTCAGAAGAAGCTCAACACAAGGACTTCCTTCGCCTGCAACACGTGGAAGGGTATCATGAGCTGTCTGCAAAGACAAAGACTTTCTTTTCTACTGCTGTTGCATTATGGGATGCTGATTTCTATGTCAAAGTGGATGATGATGTTCATGTCAATTTAGGTGTCCTAGCCGCAACCCTTGCCCGTCATCGTACAAAACCGAGGGTCTACATTGGGTGCATGAAATCTGGACCTGTTCTATCTCGAAAAGATGTCAAGTACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGAAACAAATACTTCCGACACGCAACCGGGCAGATATATGCAATCTCTAAGGATTTGGCCACTTACATTTCCATTAACCAGCCGATTTTACACAAATTTGCTAATGAAGACGTCTCACTTGGTTCATGGTTCATCGGTCTTGAAGTCGAGCATATTGATGACCGCAGTATGTGCTGTGGAACCCCTCCAGACTGTGAGTGGAAGGCGCAAGCAGGTAACATATGCGTTGCATCGTTTGATTGGAGCTGCAGCGGAATCTGCAAATCAGTTGAGAAGATTAAATACGTACACTCGAAATGCGGTGAAGGAGATGGAGCTGTTTGGAGTGCTTTATTTTAG 1185 0.4287 MKTRASTKISAKWIPIFSVFSFLIGMLITNRVWEQPESNGLIISKHQRDQQELQLISEDCSNKKKQENPKDEMNELYKTHEAIQALDKQVSMLQMELAAARSSREKNSTVSATGSREGASKKKKAFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKTFFSTAVALWDADFYVKVDDDVHVNLGVLAATLARHRTKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKFANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01817 394 Coils Coil 83 103 - -
Vifa2g01817 394 Gene3D - 115 340 - -
Vifa2g01817 394 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 87 335 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vifa2g01817 394 Pfam Galactosyltransferase 139 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vifa2g01817 394 FunFam Hexosyltransferase 119 340 - -
Vifa2g01817 394 Pfam Domain of unknown function (DUF4094) 10 103 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01817 Vifa-Chr2 471718196 471720657 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01817 1 394 Glycosyltransferase AT1G77810 70.707 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01817 K20855 - gmx:100776715 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01817 2 471718196 471720657 Vifa2g01817 2 471718196 471720657 ECH