Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01787 ATGACTTCTGAGAAAGTTGAAACTGTTGTTGCTGGAAACTACTTAGAAATGGAAAGAGAAGAAGAAGGTTCAAAGTCCACTACTAGCAAACTATCTAGGCTCTTTTGGCATGGTGGTTCTGTATATGATGCTTGGTTTAGTTGTGCTTCTAATCAGGTTGCACAAGTGCTTTTGACATTGCCATATTCGTTTTCGCAACTCGGGATGTTATCTGGAATTCTATTTCAGATTTTTTATGGACTAATGGGAAGTTGGACTGCTTACATTATCAGTGTTCTTTACGTCGAATATCGAACTAGAAAAGAAAGAGAAAAAGTTGATTTCAGAAACCATGTTATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGCAAACATTGGAGAAATCTTGGACTATTTTTCAACTGCACTTTCCTTTTGTTTGGATCAGTAATTCAGCTAATCGCTTGTGCAAGTAACATATACTATATAAATGACCATTTGGACAAGAGAACGTGGACCTACATATTTGGAGCATGCTGTGCAACAACAGTTTTCATCCCCTCTTTCCATAATTACAGAATTTGGTCATTTTTGGGCCTAGTTATGACCACTTACACTGCATGGTATATGACCATAGCTTCTTTAGTTCATGGACAGGCTGAGGATGTGAAGCACTCTGGCCCAACCAAATTGGTTCTTTACTTCACTGGAGCTACCAACATTCTCTATACTTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAGAAGTTTAAGATGATATATCTAATTGCAACTCTATATGTGATGACATTAACTTTGCCATCAGCAGCTGCAGTATATTGGGCATTTGGAGATGATCTTCTCACTCATTCCAATGCTCTCTCCTTGCTCCCTAGGACAGGGTTTAGAGATTCCGCTGTCGTTCTCATGCTCATTCATCAGTTTATAACATTTGGATTTGCTTGCACACCTTTATATTTTGTGTGGGAGAAATTTGTTGGAGTTCATGAAACCAAAAGTTTGTTCAAAAGAGCATTGGTTAGGCTTCCTGTGGTAGTTCCAATATGGTTCTTGGCAATAATATTCCCATTCTTTGGCCCCATTAACTCAACTGTTGGATCACTCTTGGTTAGCTTCACAGTTTACATAATTCCTGCCTTGGCTCACATGGTCACCTTTGCTTCAGCATCAGCCAGAGAGAATGCGGTGGAGAGACCCCCTTCGATTTTAGGAGGATGGGTAGGATTGTACTCATTGAATGTGTTTGTGGCTGTATGGGTTTTGGTGGTTGGATTTGGATTAGGAGGATGGGCAAGTATGCTTAATTTTGTACACCAAGTTAAAACATTTGGACTATTTGCTAAGTGCTATCAGTGTCCACCTCACAAGGCCTAA 1398 0.3977 MTSEKVETVVAGNYLEMEREEEGSKSTTSKLSRLFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYMTIASLVHGQAEDVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVMTLTLPSAAAVYWAFGDDLLTHSNALSLLPRTGFRDSAVVLMLIHQFITFGFACTPLYFVWEKFVGVHETKSLFKRALVRLPVVVPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASASARENAVERPPSILGGWVGLYSLNVFVAVWVLVVGFGLGGWASMLNFVHQVKTFGLFAKCYQCPPHKA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01787 465 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Vifa2g01787 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01787 Vifa-Chr2 462854879 462857174 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01787 1 464 Organic Solute Cotransporters AT1G77690 86.994 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01787 K13946 - gmx:100815243 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01787 2 462854879 462857174 Vifa2g01787 2 462854879 462857174 ECH