Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01779 ATGGAAACTCAGAAGAGTCAAGTGAAGCTAACAAGAACTCAATCGTCACTTCTCAATCTCAATCTCAGTTCTTCTTCACCAACAATCCGATCGTCGTTTCAGAGCCTTTCTTCCATCAACGATTACTACGACGAAGAGGACGACAAGAACAACAAGAAGAAAATCAAGAAAGCGTCGTATTACAATTCCTCCCCGCGATCCGGGTCGACCCGAATAACCGCTCCGGTTATCGCGGTTGTTTCGTTCGGTGTCCTCGGCGTTTGTTCGTTCTTCTTCTACTTCTCGTTCCTCGGGAGGGACGAGGTGCCGACGTCGGAGAATCTGTTACTGGCTTTAATCTTCATCGCCGTCGCGCTTTACTTCGCGTCGAGGAACAAAGGCTTGATCAACCATGGTGTCTCGGTTGTGAAGCAGTGGTACGACGGGAACGTGAAGCGGTTCGGGTTAACGAAAACAGAGTCGAAACCGGTTCAGTGGTTCATTGGCGGTTCAACGACATGTACAACAACGAAGAAGAAGAGTGTGAGGGAAGGAGTTGAGTTTTACAGCAATGGTGATTTTTACGAAGGGGAGTTTCATAAAGGAAGGAGTAATGGGAGTGGTGTTTACAATTACTTTGTGAATGGAAGATACGAAGGTGATTGGGTTGATGGAAGATACGATGGTTATGGAATTGAGAGCTGGGCTAGAGGGAGTCGATATAAGGGTCAGTATAGGAAGGGAATGAGACATGGTTATGGAGTTTATAGATTCTACACCGGAGATTCTTTTTCCGGTGAGTGGTGTAATGGTCAAAGTCATGGAATGGGTCTTCAAACTTGCTCTGATGCTAGCACTTATGTTGGTCAATTCAAACATGGTGTTAAACATGGTCTTGGTTGTTACCATTTTAGAAATGGAGATAGATATGCAGGAGAGTATTTTGGAGACAAAATTCATGGATTTGGGGTCTACCATTTTGCTAATGGACATTGTTATGAAGGAGCGTGGCACGACGGTCGTAGACAAGGTATTGGTTCGTATACTTTTCGAACTGGTGATCGAAGATGTGGGGAATGGGATGCTGGCAACCTTAAGCATTCTCTGCCACCAGTAACTGATGTTGTCCTTCGAGCAATTGAGGCTGCTAGGAAAACAGCTGCGGATGCGATAAACCTCAAGTCTGTTGATGATCAAGTTAACAATGCAGTGATCGCTGCAAACAAGGCTGCCACTGCTGCTAGAGTGGCTGCTGTGAAGGCTGTGCAGAACAGAATGGATGGAAAATTTTGTGAAACTTTTGTCTGA 1287 0.4545 METQKSQVKLTRTQSSLLNLNLSSSSPTIRSSFQSLSSINDYYDEEDDKNNKKKIKKASYYNSSPRSGSTRITAPVIAVVSFGVLGVCSFFFYFSFLGRDEVPTSENLLLALIFIAVALYFASRNKGLINHGVSVVKQWYDGNVKRFGLTKTESKPVQWFIGGSTTCTTTKKKSVREGVEFYSNGDFYEGEFHKGRSNGSGVYNYFVNGRYEGDWVDGRYDGYGIESWARGSRYKGQYRKGMRHGYGVYRFYTGDSFSGEWCNGQSHGMGLQTCSDASTYVGQFKHGVKHGLGCYHFRNGDRYAGEYFGDKIHGFGVYHFANGHCYEGAWHDGRRQGIGSYTFRTGDRRCGEWDAGNLKHSLPPVTDVVLRAIEAARKTAADAINLKSVDDQVNNAVIAANKAATAARVAAVKAVQNRMDGKFCETFV 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01779 428 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 263 308 - -
Vifa2g01779 428 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 36 391 - -
Vifa2g01779 428 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 276 356 - -
Vifa2g01779 428 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 217 262 - -
Vifa2g01779 428 Gene3D - 263 308 - -
Vifa2g01779 428 Gene3D - 309 369 - -
Vifa2g01779 428 Gene3D - 170 217 - -
Vifa2g01779 428 Gene3D - 218 262 - -
Vifa2g01779 428 SMART morn 186 208 IPR003409 -
Vifa2g01779 428 SMART morn 324 345 IPR003409 -
Vifa2g01779 428 SMART morn 301 322 IPR003409 -
Vifa2g01779 428 SMART morn 278 299 IPR003409 -
Vifa2g01779 428 SMART morn 209 230 IPR003409 -
Vifa2g01779 428 SMART morn 255 276 IPR003409 -
Vifa2g01779 428 SMART morn 232 253 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 303 324 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 188 205 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 234 255 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 326 348 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 257 276 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 211 233 IPR003409 -
Vifa2g01779 428 Pfam MORN repeat 280 302 IPR003409 -
Vifa2g01779 428 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 182 287 - -
Vifa2g01779 428 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 171 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01779 Vifa-Chr2 459231064 459232863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01779 183 362 Acyl Lipid Metabolism Gene Families AT1G21980 35.000 1.05e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01779 - - cave:132183918 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01779 2 459231064 459232863 Vifa2g01779 2 459231064 459232863 ECH