Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01777 ATGGGTTTCTCGAAGGAACAGCTACTTCACCGGTTACAGGAGCTTCGGATTGAATTTTCTAAGTATGAACATCCTGTTGTTTTGACTGTTGAAGCTCAGGCAAAGTATGTTGGAAATTTGGGTGGTGGACTCAGTAAAAACCTATTTTTGAAGGATAAGAAAAACAGGTTTTATGTTGTTTCTGCTTTAGCTGATACCAAAGTAGATCTGAAAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTTTGAGAATGGCACCTGAAGAGGCTTTGGGTGAATTACTTCAGGTACCCTTGGGCTGTGTAACACCATTTGCAGTAGTGAATGAATCAGCACGAGATGTTTCGCTGCTATTAGATCAAGGATTCAAGACACATGAGCATTGTTTCTTCCATCCACTGTCTAATGACATGTCCATATCTCTAAATGCACGTGGTCTTGACACATTTCTTAAATCTATAGGAAGAGATCCCTCATATGTCGATCTGGAGGCCAATCCTACAGTGGGGAAAGATCAACCCCCTGATCTAGCTGCATTAGTTCCATCCGGTTCAATAGTTTTGCCCGATCAACCAGGAAAACAATCATCTGCAGTAACTTCTAAGGACGAAAACCTTGTTTCTGAGGAAAATAAGTCCAAGACAGTTCCAGTCAGAGTTGTCAAGCCATCCGTAGCTGCGAACAATTCAAAAGGAACCCCGGGAAAAGATGTTCAGTCATCAAGATCCTCTGCAGACGTTGGGAAATTAGTTGAAGAGATATTGCAAAAAACATCAAAATTATTGCTTTCAGAGATCAATGACGAAACTATAAAGACATATGGAGACCAACTGGGTACTGCGGTATCAGACAAACTACAGAAAAACCTCATCTCAGATTTTAAAAATCTTGCTATGATATTTAAGAACACTGCATATACAGAAGGGTTCCATGCCGGTACTCTCCATCAGCCAAAACGTTGA 966 0.411 MGFSKEQLLHRLQELRIEFSKYEHPVVLTVEAQAKYVGNLGGGLSKNLFLKDKKNRFYVVSALADTKVDLKVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLLDQGFKTHEHCFFHPLSNDMSISLNARGLDTFLKSIGRDPSYVDLEANPTVGKDQPPDLAALVPSGSIVLPDQPGKQSSAVTSKDENLVSEENKSKTVPVRVVKPSVAANNSKGTPGKDVQSSRSSADVGKLVEEILQKTSKLLLSEINDETIKTYGDQLGTAVSDKLQKNLISDFKNLAMIFKNTAYTEGFHAGTLHQPKR 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01777 321 MobiDBLite consensus disorder prediction 227 245 - -
Vifa2g01777 321 Pfam Aminoacyl-tRNA editing domain 24 146 IPR007214 GO:0002161
Vifa2g01777 321 SUPERFAMILY YbaK/ProRS associated domain 3 164 IPR036754 GO:0002161
Vifa2g01777 321 FunFam Putative prolyl-tRNA synthetase 1 169 - -
Vifa2g01777 321 MobiDBLite consensus disorder prediction 190 205 - -
Vifa2g01777 321 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 320 IPR040285 -
Vifa2g01777 321 CDD PrdX_deacylase 5 162 - -
Vifa2g01777 321 MobiDBLite consensus disorder prediction 184 245 - -
Vifa2g01777 321 Gene3D - 2 171 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01777 Vifa-Chr2 458401102 458404847 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01777 - - ahf:112764287 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01777 2 458401102 458404847 Vifa2g01777 2 458401102 458404847 ECH