Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01756 ATGGTGGACTTTCAATGTCACCGTCATCATCGTCAACAAGTGGATCTTCCTGAAATTGGATTTCAAGTTCCCCCTTTCAGTATCCTGTGTCCACTTTATCTGCTCAGCTATTGGAGCATATGTGTGCTGGGTAATGTGAGCCTACGGTACATCCCAGTTTCTTTTATGCAGACAATTAAGTCATTCACACCTGCAACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGTATTTTGACTGGCGTATTTGGGCTTCTCTTATACCCATTGTTGGAGGGATTCTTCTCACATCTGTAACAGAGATGAGCTTTAATACGTTTGGATTTTGTGCTGCCTTACTTGGCTGTTTGGCTACATCTACAAAGACCATCCTTGCAGAATCTCTATTGCACGGATACAAGTTCGACAGTATAAACACGGTTTATTACATGGCACCTTATGCAACCATGATCTTGGTGCTTCCTGCCATGTTACTTGAAGGCAATGGAGTTCTGGAATGGCTTAATACTCATCCATATCCTTGGTCGGCCCTCATCATTATTTTCAGTTCTGGGGTGTTGGCTTTTTGTCTTAACTTCTCCATTTTTTATGTGATCCATTCCACCACTGCTGTAACTTTTAACGTTGCTGGGAATCTTAAGGTTGCTGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATCTCATATTTTAATGCCGCTGGGTGTGCCGTGACTCTTGTGGGTTGTACATTCTATGGTTATGTGAGGCACTTGCTCTCTCAACAGCCATCAGTTCCAGGAACTCCTCGGACACCAAGAACCCCTCGGAGTAAGATGGAGTTGCTTCCACTTGTAAATGATAAATTAGAAAATAAGTTCTAA 870 0.4276 MVDFQCHRHHRQQVDLPEIGFQVPPFSILCPLYLLSYWSICVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWRIWASLIPIVGGILLTSVTEMSFNTFGFCAALLGCLATSTKTILAESLLHGYKFDSINTVYYMAPYATMILVLPAMLLEGNGVLEWLNTHPYPWSALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYFNAAGCAVTLVGCTFYGYVRHLLSQQPSVPGTPRTPRTPRSKMELLPLVNDKLENKF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01756 289 SUPERFAMILY Multidrug resistance efflux transporter EmrE 167 247 - -
Vifa2g01756 289 PANTHER SOLUTE CARRIER FAMILY 35 29 252 - -
Vifa2g01756 289 Gene3D - 17 104 - -
Vifa2g01756 289 Pfam Triose-phosphate Transporter family 41 248 IPR004853 -
Vifa2g01756 289 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01756 Vifa-Chr2 452580237 452584637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01756 42 288 Organic Solute Cotransporters AT1G77610 89.113 2.28e-160 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01756 K26222 - gmx:100786532 473.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01756 2 452580237 452584637 Vifa2g01756 2 452580237 452584637 ECH