Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01754 ATGGAAACTCGCGAAACCGCCGCCAAGTCGGGTGAAAACCCGATTAACGGAATTAGGAAAGTGAATTTACGAGCTGAGATTGACACATCGCCGCCGTTCGAGTCAGTCAAGGAAGCCGTGACCCGTTTCGGCGGAAGCGGACCATGGTTACCTCTTTACAGACTTGGAGAAGCTTTTAACAACTTTGAAGATTTTGATTTAAAGAAAGTGGAGGAACAAGCTGCGGAGTTGGAGAAGGATTTGATTGTGAAAGAACTCGAAACGCTTGATGTGCTCGAAGAGCTTGGTGCGACAAAAAGGATTGTGGAGGACTTAAAGCAGCAGCTACAAAAAGAGGCATTGAAACTGTCCGCGACTCCGGATTTACATTCTTATGAACATGTTGGAGCTCCGGTTGTTAAGGAGATGAATAAGGAAAGTAATGATGAAGAGAAGATGTTGCAATCACCTGATATGATTTTTATGGAATTGAAACAAGCCAAGGTGAATCTTGGTAATACTATGAATGAACTTGAGGCCATACAATCGTCGGTTGAGTCTTTAAATAAGAAGATGAAGAAGGAGAAAGCTTATCTGGAGAGGACAAGAGAAAAGCTTGCATCCAAGTTTGCAGCTATTTCTGCTCAAGAGAAGGCCCAAGAGCAAGCTAGATTCAATCCACCACCGTCACCTCAGGTGGAATTCACTTTCGATATTCCTGCAAATATGAGGGATTTTGTTTGTGATTCTGAGCAGCACAATGGAATGGTTGAAACAGGAAAATCTCAAGTTTCAAAGCCGGTATCTTTGTATGAAGAACATGAGTTTAGTGTTAAGACCGCTGAGATGAGGTGGCTTGCAGCCAAAAAGATGGAAGAAGCTGCAAAGGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTGTCTGGTGTTGAGAGATCATATGAATTCGCTCTACCGGAGCCTCGGAAAGTCACTTTTGCTTTAGCCGAAAACTCTCCTCTAAATCCCGGGGCTATCATGATACCTGAGGAGTTTAACTTGAAGAAGGTAATAGATTCGAAATTTCAAATGGATGAAACAAATATTTCTAAACGGACTATTCTGAAAAAGTTGGAGGAGGCATCTGAAGAAATTCTACGCAGCAAACAAGTCTTAAATGATGCTTTAAACAGAATTGAAATCGCAAACAGAAAGCAACATGCTGCTAAGGAAGCTCTTCGGAAATGGATACCCGAGGTTGATCTAAAGGAGAAGCCAGTGTATAACTCATTTAACTTCAACAACTTTAATCAAGCTGGAATTCGTCATGACTCTTCTCTACCAGATGTAACCAGGTCAACAATAGCAAACAATAATCCGAAGCGTGTTTCGAGGCCAACAACTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGAACATGCTGCAAGAAAGGAGATGGAAGAGCATACTGAAAGACGAAAGGTAGCATTGAGTCAAATGCTTCAAGCATTGAGGGAAGATCTAACCCTTTCACCAGAACCTGAGAAAGATCATGGGATTCATCAAAAGCAGTCCGCGACACCAAGGAAGAAGTTTGGATTCATCCCTATGACTAGGACAAGTAAGAAAAAGACATGA 1611 0.4215 METRETAAKSGENPINGIRKVNLRAEIDTSPPFESVKEAVTRFGGSGPWLPLYRLGEAFNNFEDFDLKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEALKLSATPDLHSYEHVGAPVVKEMNKESNDEEKMLQSPDMIFMELKQAKVNLGNTMNELEAIQSSVESLNKKMKKEKAYLERTREKLASKFAAISAQEKAQEQARFNPPPSPQVEFTFDIPANMRDFVCDSEQHNGMVETGKSQVSKPVSLYEEHEFSVKTAEMRWLAAKKMEEAAKAAEAIALAEIKALSGVERSYEFALPEPRKVTFALAENSPLNPGAIMIPEEFNLKKVIDSKFQMDETNISKRTILKKLEEASEEILRSKQVLNDALNRIEIANRKQHAAKEALRKWIPEVDLKEKPVYNSFNFNNFNQAGIRHDSSLPDVTRSTIANNNPKRVSRPTTSMRDVLSRKQVPEEHAARKEMEEHTERRKVALSQMLQALREDLTLSPEPEKDHGIHQKQSATPRKKFGFIPMTRTSKKKT 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01754 536 Coils Coil 352 400 - -
Vifa2g01754 536 Coils Coil 60 87 - -
Vifa2g01754 536 Pfam Weak chloroplast movement under blue light 136 406 IPR008545 -
Vifa2g01754 536 Pfam Weak chloroplast movement under blue light 25 111 IPR008545 -
Vifa2g01754 536 MobiDBLite consensus disorder prediction 500 515 - -
Vifa2g01754 536 MobiDBLite consensus disorder prediction 463 483 - -
Vifa2g01754 536 Coils Coil 157 202 - -
Vifa2g01754 536 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 25 114 - -
Vifa2g01754 536 Coils Coil 92 112 - -
Vifa2g01754 536 MobiDBLite consensus disorder prediction 498 536 - -
Vifa2g01754 536 MobiDBLite consensus disorder prediction 439 462 - -
Vifa2g01754 536 MobiDBLite consensus disorder prediction 439 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01754 Vifa-Chr2 451738080 451739850 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01754 - - mtr:11406780 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01754 2 451738080 451739850 Vifa2g01754 2 451738080 451739850 ECH