Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01752 ATGTTATGCGGCGTCGTCAGCACTTCCTTTTCTTCCATCTTACCCAGAAATAAACAACCCTCTCTCTCCTTTCATTCCAAATCAATCTCATGTTCTCTCCCAGGAGCTCTTGTAGAATCAAAAGCAACAAATGTTGCTGAACCGCTTTTGCTTAATGCGGTTCGAGGACTAGATGTTGAAAGACCCCCGGTTTGGCTTATGAGACAAGCCGGCAGGTACATGAAGAGTTACCAAGCTATCTGTGAGAAGCATCCTTCATTCCGCGAAAGGTCTGAAAATGTTGATCTTGTGGTGGAAATTTCTTTGCAACCTTGGAAGGTTTTCCAGCCGGACGGGGTAATTTTATTTTCTGATATTCTTACCCCTCTTTCTGGAATGAATATTCCGTTCGATATTGTGAAAGGGAAGGGTCCTGTCATTTTTGATCCTGTTTACTCAGCCGGCCAAGTTGATCAAGTGAGGGAGTTTGTTCCTGAAGAATCAGTTCCATATGTCGGTGAAGCACTATCAATTTTGAGGAAAGAGGTGGATAATAAAGCTGCGGTCCTGGGTTTTGTGGGAGCTCCATTCACCTTGGCATCATACGTGGTTGAGGGCGGTTCATCAAAGCACTTCTCGAAAATAAAGAGATTGGCTTTCTCTGAACCCAAGATTCTTCACTCATTACTACAGAAATTCACAACATCCATGGCTCGATACATCCAATATCAAGCGGACAATGGAGCTCAAGCTGTTCAGATCTTTGATTCATGGGCAACAGAGCTTAGTCCAGTAGATTTTGAACAGTTCAGTTTGCCTTACTTGAAGCAGATCATCAATACCGTGAAGAAAAGCCATCCAGAACTCCCTCTTATTCTGTATGCGAGTGGATCAGGAGGCTTACTTGAACGAATAGCCGCGACTGGTGTGGATGTAGTTAGCTTGGATTGGACAGTTGATATGGCCGATGGTAGAAGGCGATTGGGACCAAATGTAGCCATCCAAGGTAACGTTGATCCCGGTGTTCTTTTTGGTGCGAAAGAGCTTATCACTGATAGGATTTATGATACAGTGAGAAAAGCTGGTGTAGGGAAACATATATTGAATCTAGGTCATGGTATTGTAGTAGGTACACCTGAGGAGAATGTAGCACATTTTTTTGAGGTTGCCAAGGGAGTGAGATACTAA 1167 0.4362 MLCGVVSTSFSSILPRNKQPSLSFHSKSISCSLPGALVESKATNVAEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQAICEKHPSFRERSENVDLVVEISLQPWKVFQPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPVYSAGQVDQVREFVPEESVPYVGEALSILRKEVDNKAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKILHSLLQKFTTSMARYIQYQADNGAQAVQIFDSWATELSPVDFEQFSLPYLKQIINTVKKSHPELPLILYASGSGGLLERIAATGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGAKELITDRIYDTVRKAGVGKHILNLGHGIVVGTPEENVAHFFEVAKGVRY 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01752 388 ProSitePatterns Uroporphyrinogen decarboxylase signature 1. 63 72 IPR000257 GO:0004853|GO:0006779
Vifa2g01752 388 Hamap Uroporphyrinogen decarboxylase [hemE]. 47 387 IPR006361 GO:0004853|GO:0006779
Vifa2g01752 388 Pfam Uroporphyrinogen decarboxylase (URO-D) 49 384 IPR000257 GO:0004853|GO:0006779
Vifa2g01752 388 CDD URO-D 51 384 IPR006361 GO:0004853|GO:0006779
Vifa2g01752 388 ProSitePatterns Uroporphyrinogen decarboxylase signature 2. 183 199 IPR000257 GO:0004853|GO:0006779
Vifa2g01752 388 NCBIfam uroporphyrinogen decarboxylase 50 384 IPR006361 GO:0004853|GO:0006779
Vifa2g01752 388 Gene3D - 36 388 IPR038071 -
Vifa2g01752 388 FunFam Uroporphyrinogen decarboxylase 39 388 - -
Vifa2g01752 388 PANTHER METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED 44 388 - -
Vifa2g01752 388 SUPERFAMILY UROD/MetE-like 49 387 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01752 Vifa-Chr2 451674970 451677292 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01752 K01599 - gmx:100817154 665.996