Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01750 ATGGAAACCAAAGATGATTATACCCAAGATGGCACTGTTGATTTCCGTGGCAAACCTGCTGTTCCATCCAAAACTGGCAAATGGAAAGCTTGCGCTTTTCTCGTTGGTTATGAAGCATTTGAAAGAATGGCTTTCTATGGTGTAGCATCAAACTTGGTGAATTACCTTACAACACAGCTTCATGAAGACACTGTTTCATCGGTTAGGAATGTGAATACTTGGTCAGGATCTGTTTGGATTACACCAATTCTTGGTGCTTACATAGCCGATTCTCACTTGGGTCGATTCTGGACTTTCACCCTCTCATCTCTCATTTATGTCTTGGGAATGACACTTCTTACTATAGCTGTATCACTCAAGAGTTTGAAACCAACATGCACAAATGGAGTTTGTAACAAAGCCTCGACATCACAAGTTGCATTTTTCTACACAGCACTTTACACTATGGCAATTGGGGCAGGTGCCTTGATTGCAACTTTAGGCCTTGTATACATTCAAGAGAATTTAGGATGGGGACTTGGATATGGTATTCCTACCGCTGGTTTGTTATTGTCCTTGGTTATTTTCTATATAGGGACGCCGATTTATCGACATAAAGTTAGGACTACTAAAAGTCCTGCTAGGGACATTATTCGTGTCCTTATTGCTGCCTTTAAGAACAGAAAACTTCAACTTCCTAGTAATCCTTCAGATCTGCATGAGTTTGAGATGGAATATAATGTTGGCAGGGGAAAACGGCAAGTCTATCACACTCCAACTTTGAGGTTTTTGGACAAAGCTGCTATTAAAAAAGATCCTACTACAGGCTCATCAAGAGTACCAATGACAGTAAACCAAGTAGAAGGAGCAAAGCTAATCTTTGGTATGCTCCTAATATGGCTAGTAACACTGATTCCAAGCACCATTTGGGCACAAATCAACACTCTTTTTGTGAAACAAGGCACCACCTTAGACAGAAACCTTGGTCCTAATTTCAAAATTCCAGCGGCATCTCTTGGTAGCTTTGTAACCCTCTCCATGTTAGTCTCAGTGCCAATGTACGACCGACTTTTCGTTCCGTTCATGCGCCAGAGAACCGGCCACCCTAGGGGAATCACATTGCTTCAAAGACTCGGAATTGGATTTTCAATCCAAATCATAGCAATTGCAATTGCTTATGCAGTCGAAGTTAGAAGAATTCATGTCATAAAAGAGAATCACATTTTGGGTCCTAAAGATATTGTCCCTATGAGTATATTTTGGCTGTTACCGCAATATGTTCTTATTGGTATAGCAGATGTTTTCAATGCAATTGGATTGTTGGAATTTTTCTATGATCAATCCCCTGAAGATATGCAGAGTCTTGGAACAACTTTCTTCACGAGTGGAATCGGTGTTGGGAATTTCTTGAACAGTTTTTTGGTGACAATGACTGATAAGATAACAGGAAGAGGGTACATTTACAAGAAGGAGCCAACAAGGGTCAAAGAGGCGCTTTGCGTTCAAATGGAGGTTAACCCGACTTTGGATGCATCTCTTGGTTTACAAGTATGA 1533 0.407 METKDDYTQDGTVDFRGKPAVPSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNTWSGSVWITPILGAYIADSHLGRFWTFTLSSLIYVLGMTLLTIAVSLKSLKPTCTNGVCNKASTSQVAFFYTALYTMAIGAGALIATLGLVYIQENLGWGLGYGIPTAGLLLSLVIFYIGTPIYRHKVRTTKSPARDIIRVLIAAFKNRKLQLPSNPSDLHEFEMEYNVGRGKRQVYHTPTLRFLDKAAIKKDPTTGSSRVPMTVNQVEGAKLIFGMLLIWLVTLIPSTIWAQINTLFVKQGTTLDRNLGPNFKIPAASLGSFVTLSMLVSVPMYDRLFVPFMRQRTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVRRIHVIKENHILGPKDIVPMSIFWLLPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTMTDKITGRGYIYKKEPTRVKEALCVQMEVNPTLDASLGLQV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01750 510 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 153 482 - -
Vifa2g01750 510 Gene3D MFS general substrate transporter like domains 1 152 IPR036259 -
Vifa2g01750 510 Gene3D MFS general substrate transporter like domains 153 484 IPR036259 -
Vifa2g01750 510 SUPERFAMILY MFS general substrate transporter 17 476 IPR036259 -
Vifa2g01750 510 Pfam POT family 148 476 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01750 Vifa-Chr2 451665438 451668686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01750 1 478 Organic Solute Cotransporters AT2G40460 69.439 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01750 K26562 - gmx:100803784 844.343