Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01732 ATGGCATCTTCCAAAAGTTTGAAAATTGGCATTGTTGGGTTTGGTACATTTGGTCAATTTCTGGCAAATACAATGATCAAACAAGGCCATACTCTAACTGCTACTTCAAGAACAGATTACTCTCAACTCTGTCTCCAAATGGGTATCCATTTCTTCAGGGATGTTACTGCATTACTTGAGGCTGACATGGATGTCATACTGTTATGCACATCTATTTCCTCGTTGTCCGAGGTTGTCGGGTCAATGCCACTCAGTTGTCTGAAACGTCCGACGCTTTTTGTCGATGTTCTTTCGGTTAAAGAGCACCCGAGGAACCTTCTTTTAAGAGTGCTGCCAGAGGAGTTAGACATACTCTGCACACACCCAATGTTTGGACCAGTGAGTGGGAAAAATGGCTGGCAAAATCTGACTTTCATGTATGACACAGTTCGAATAAAGGATGAAGCTACCTGCTCTAAATTTCTCCAAATTTTTGAAACTGAGGGTTGCAAGATGGTAGAAATGTCCTGTGAGGAACATGATAGGGCAGCTGCAAAGAGCCAATTTATCACACACACAATAGGCAGGACATTGGCAGAAATGGATATTAAATCTACACCTATTGACACCAAGGGCTTTCAGGCACTTGTTCAGTTGAAAGAACCCGTCATGGGATGCAGTTTTGATCTGTATAGTGGATTATTTGTGTACAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCTCTACATAAAGTCAAAGAGCTGCTGGTCCAAAGGATGGATGAAGGACAGAACTCAGAAAGAACTCAAAGTTGA 804 0.4229 MASSKSLKIGIVGFGTFGQFLANTMIKQGHTLTATSRTDYSQLCLQMGIHFFRDVTALLEADMDVILLCTSISSLSEVVGSMPLSCLKRPTLFVDVLSVKEHPRNLLLRVLPEELDILCTHPMFGPVSGKNGWQNLTFMYDTVRIKDEATCSKFLQIFETEGCKMVEMSCEEHDRAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFQALVQLKEPVMGCSFDLYSGLFVYNRFARQELENLEHALHKVKELLVQRMDEGQNSERTQS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01732 267 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 7 267 IPR003099 GO:0004665|GO:0006571|GO:0008977
Vifa2g01732 267 Coils Coil 231 258 - -
Vifa2g01732 267 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 254 IPR008927 -
Vifa2g01732 267 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 168 IPR036291 -
Vifa2g01732 267 PANTHER AROGENATE DEHYDROGENASE-RELATED 3 262 IPR045011 GO:0006571|GO:0033730
Vifa2g01732 267 Gene3D - 1 174 - -
Vifa2g01732 267 Pfam Prephenate dehydrogenase, nucleotide-binding domain 43 131 IPR046826 GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01732 Vifa-Chr2 447228642 447230237 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01732 K15227 - gmx:100787362 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01732 2 447228642 447230237 Vifa2g01732 2 447228642 447230237 ECH