Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01724 ATGAATCCTCGGCATCTGGAACCTTATATAAACCGCCAATTCTTAATCAATGTTCGAAACATCCTACGTCTCATTTCCAAAACAACTCAAAACCTAATCATGTCCCAACCACAACCCTCTTCTTCTTCTTCTTCTTCTTCCGACCCTCCACCTTTCGATCCCAACCAACCCTCCATTCCTATTTCATACCCAATCAAAACCCTCCAAGACCTTCAATCTCGCTCTTACTTCGATTCCTTTCACTACCCTTTTAACATATCTTCAGTTCCCATTTCTTCTTCTGAACTTCCCAATAGACGTAGATTGTTGGTTTGTCATGATATGGCTGGTGGTTACTCTGATGATAAGTGGATTCAAGGTGGGACTAATCCCGATGCTTATGCTATTTGGCATTGGCATTTGATTGACGTTTTTGTTTACTTTTCTCATTCGCTGGTTACTCTTCCTCCTCCTTGCTGGATTAACACCGCTCATCGTCACGGTGTCAAGGTGCTGGGCACTTTTATCACCGAATGGGATGAAGGAAAGGCTACCTGTGATGTACTCCTTTCAACAAAGGAGTCTGCACAAATGTATGCTGAACGTCTCGCGGAGCTTGCTGTTCGTTTAGGCTTCGACGGGTGGCTAATAAATATGGAGGTAAAGTTGGATCCGAAGCAAATTCCTAATTTGAAAGAGTTTGTAGACCATTTGTCGTTAACAATGCATTCCTCATTGCCTGGATCATTAGTGCTGTGGTATGACAGTGTTACAATTGACGGTGAACTGAAATGGCAAGATCAGCTAAACGAATATAATAAGCCGTTCTTTGATATATGCGATGGAATATTTGTAAACTATACATGGGAGGAAAGCTATCCAAAGCTCTCCGCTGATGTGGCTGGTGATCGGAAGTTCGACGTTTACATGGGAATTGATGTATTCGGAAGGAACACATATGGTGGTGGACAGTGGAATGCAAATGTTGCTCTTGATGTAATAAGAAAGAATGAAGTCTCTGCTGCAATATTTGCTCCCGGATGGGTCTATGAAACAAAGCAACCACCAGATTTTGAGACTGCTCAGAATAGTTGGTGGGGTCTTGTGGAGAAATCTTGGGGAGTACTGCAAAATTATACTGGACCACTACCGTTACATACAAATTTTGATCAGGGACGTGGTTATCATATTTCAGTTGATGGAAACAATGTTTCAGATGCTTCATGGTGCAACATTTCTTGCCAAGGCTTTCAGCCACTCCTCCCGCTTGCTGATCCTAGAAATCCTATTCAAGTTACCGTAGACTTGAAGGAAGCATCATATAATGGAGGGGGGAACATTACTTTCAAAGGATCTCTTGAAAAGCCAACTTACTTTGAGAAGAAAATCCTTCAAGGAGAGTTTATTTTGAGCGAGTTGCCGATCCACTTTACTTATTCTGTGAAATCTAATGGCAATTCTTCGTTGGGACTTAAACTCGTGTTCACTTCAAACAAAGACGAAACAGTTTCTGCATTTCTCACATCGCAGGAAGTGAATAACTTCTCAAGTAAATTCGACAAAGTCATCAAAACTCGTGAACAGAAAGTGTTTTCCTCTGGATGGGCTATAAACGAAAGTGAAATTGAAATGAACGGATACACTTTAACCGAAATCCATGCAGTGTGCTACATATCAGATTGCAAAGATTTTACCTCGGCTTCTCCATCAGACTATTATGCACTTCTTGGTCACATCACAGTCAAGAGTTCTGACTACAAGCCGAAATTTCCCGTTTCTTCTTCCTGGCTAGTTGACGGTAAATTTATAAAATGGACATCTGGTTCAGAAGGTTCGAAGACGCTTAGCATTAAAATTTCATGGACACTGAAAGATGGGAAGAATTATCTCTCTCTGAAGTACAACATCTATTTGGTAAAATCATCAAAACAAGCAAGTGATAGTCCAAGTAGAACTTCAGAATCTGTGAAGGAGGAGTACCTAGGAGTAGCACAAGTAAACTGCTTTTATGTTTCTGATCTTGAAGTTCCTTCAGATACTTCTAGCCTCAAATTTATAGTACAAGTTTGTAGTGTGGATGGGACAATTCAGGCATTGGATGAGTCTCCATATTATGAATTGGAGGTTGAAAGTCCCTAA 2118 0.4084 MNPRHLEPYINRQFLINVRNILRLISKTTQNLIMSQPQPSSSSSSSSDPPPFDPNQPSIPISYPIKTLQDLQSRSYFDSFHYPFNISSVPISSSELPNRRRLLVCHDMAGGYSDDKWIQGGTNPDAYAIWHWHLIDVFVYFSHSLVTLPPPCWINTAHRHGVKVLGTFITEWDEGKATCDVLLSTKESAQMYAERLAELAVRLGFDGWLINMEVKLDPKQIPNLKEFVDHLSLTMHSSLPGSLVLWYDSVTIDGELKWQDQLNEYNKPFFDICDGIFVNYTWEESYPKLSADVAGDRKFDVYMGIDVFGRNTYGGGQWNANVALDVIRKNEVSAAIFAPGWVYETKQPPDFETAQNSWWGLVEKSWGVLQNYTGPLPLHTNFDQGRGYHISVDGNNVSDASWCNISCQGFQPLLPLADPRNPIQVTVDLKEASYNGGGNITFKGSLEKPTYFEKKILQGEFILSELPIHFTYSVKSNGNSSLGLKLVFTSNKDETVSAFLTSQEVNNFSSKFDKVIKTREQKVFSSGWAINESEIEMNGYTLTEIHAVCYISDCKDFTSASPSDYYALLGHITVKSSDYKPKFPVSSSWLVDGKFIKWTSGSEGSKTLSIKISWTLKDGKNYLSLKYNIYLVKSSKQASDSPSRTSESVKEEYLGVAQVNCFYVSDLEVPSDTSSLKFIVQVCSVDGTIQALDESPYYELEVESP 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01724 705 FunFam cytosolic endo-beta-N-acetylglucosaminidase 54 371 - -
Vifa2g01724 705 Pfam Glycosyl hydrolase family 85 112 389 IPR005201 GO:0005737|GO:0033925
Vifa2g01724 705 Gene3D Glycosidases 55 372 - -
Vifa2g01724 705 MobiDBLite consensus disorder prediction 34 56 - -
Vifa2g01724 705 CDD GH85_ENGase 103 422 - -
Vifa2g01724 705 MobiDBLite consensus disorder prediction 34 49 - -
Vifa2g01724 705 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 35 699 IPR032979 GO:0033925
Vifa2g01724 705 Gene3D - 375 574 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01724 56 703 Glycoside Hydrolase AT5G05460 57.686 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01724 K01227 - gmx:100804658 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01724 2 444853405 444856575 Vifa2g01724 2 444853405 444856575 ECH