Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01713 ATGACGAATGTTGATGAACTCTTAACTTCCTTATCCTCAGATATAGCCACCTACACCGGCAAAGACCCTCTTCTTCCTTGGCTTCGAGGAATCAAAAAGTTGAAGGACAATCTTCCCTCAAAAACCCTCAACGAAAAACTTCCCGAATTCTTGCAGAAATGCGCCCAAACATTCGAGCTCGACCGACGTTACAAAAACGACTTACGTTACATTCGAGTTTGGCTCCATTTGATGGATTTTGTTGATGATCCGAGTGCGTTACTGAGAACCATGGGTGTTAATTTTATTGGAGTAAAACGTTGTCAATTCTATCAAGCTTATGCTCTTTACTATGAGAAGAATAAGATGTATGATGAAGCAGAAAAAATGTACCGTTTGGGAGCTAAGAACCTTGCAGAGCCCGTGGAAGAAATGCAGAAATCTTATGAACAATTTCTTCAACGCATGAAGCGTAAGAAGAAAATTCAGGAAATGAGAGGTTCTGATAGACATGTAAAGGCTAAAAATGAGGAGAACAAGAGATTTCGTGGTGAACATACAGTCGTAGTGAACAAGTTTGTTGACACTGCCATGGATGGAAAGTCTGAGGCAGAAAATGCATGCCATAATGGACTAGTTGATCCTACAATAAATATGAAGGAGGCAATGAATGCCATTAACAGCATGTTCAGTGAGCCACTGGAGACTGTTCCTTTGGCAAGGAAATCACATAAAAACGTATCAAAAGAAAACCGTAAGACAAATAGCAACTTTGAAGTTTTTGTTGATGAAAACTTGGACAATGGAATCAAACCAAGTGGTTCCTTATCGGATCAGCAAAGGACTGAAGCTGGCAAGCCTCACCAAGAATCATTCCAGATATATATTGATGATGAAGAACGTTCTGAAGGTTCTACTTCATCAGCTTCAAAAGTAAATGGCTCTGTTTTCCCCCGACCTAAGGACGTTCCTTCTAAAAAGTCTAGTGATATGGATGCACACAGATCTCGGAATTCAAAGTTCAGAGAAGATACAGATGTTTGCAGATTTGTTGGTTCTGCCATTTTGGATGAACCAGAGGTGGAAAATGTTTGTCACAACGGTTTAGTAGACCCCACAGTCAACATGAAGGAAGCAATGAATGACATAAATAACATGTTTGGGGAACCAATAGATTTTGTTAGGAGAAAAAGATCAGTGAAGGAGGAGAAGGCACCGGTGAACAGCAGCGGAAAGGAACTCTGTGGGTTTTCAATCCTGGCTGATGATGATGTTGACCTTGAGCCGAAACAACGTCCTCCACTACCAAAATTGCCGCGAAAGTCAAAGGAATCTGATTTGTTTGAGCCAACTCTCCACACAAAGGAAGCCATGGATGACATTAACAAGATGTTTAATATGCCTCTGAATTTTTAG 1395 0.4065 MTNVDELLTSLSSDIATYTGKDPLLPWLRGIKKLKDNLPSKTLNEKLPEFLQKCAQTFELDRRYKNDLRYIRVWLHLMDFVDDPSALLRTMGVNFIGVKRCQFYQAYALYYEKNKMYDEAEKMYRLGAKNLAEPVEEMQKSYEQFLQRMKRKKKIQEMRGSDRHVKAKNEENKRFRGEHTVVVNKFVDTAMDGKSEAENACHNGLVDPTINMKEAMNAINSMFSEPLETVPLARKSHKNVSKENRKTNSNFEVFVDENLDNGIKPSGSLSDQQRTEAGKPHQESFQIYIDDEERSEGSTSSASKVNGSVFPRPKDVPSKKSSDMDAHRSRNSKFREDTDVCRFVGSAILDEPEVENVCHNGLVDPTVNMKEAMNDINNMFGEPIDFVRRKRSVKEEKAPVNSSGKELCGFSILADDDVDLEPKQRPPLPKLPRKSKESDLFEPTLHTKEAMDDINKMFNMPLNF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01713 464 ProSiteProfiles BUB1 N-terminal domain profile. 11 170 IPR013212 -
Vifa2g01713 464 MobiDBLite consensus disorder prediction 316 333 - -
Vifa2g01713 464 Coils Coil 135 155 - -
Vifa2g01713 464 MobiDBLite consensus disorder prediction 419 440 - -
Vifa2g01713 464 Gene3D - 9 167 - -
Vifa2g01713 464 MobiDBLite consensus disorder prediction 262 333 - -
Vifa2g01713 464 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 10 464 IPR015661 GO:0007094
Vifa2g01713 464 Pfam Mad3/BUB1 homology region 1 10 127 IPR013212 -
Vifa2g01713 464 SMART mad3_bub1_i 4 128 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01713 Vifa-Chr2 443360069 443362727 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01713 - - mtr:11414327 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01713 2 443360069 443362727 Vifa2g01713 2 443360069 443362727 ECH