Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01711 ATGCTTCACTCCACTTCTCTTCTCCACCATACCCACCGTTTCCTTTTCTCTTTCCGCTCCAAACCTTCTCTCTTAGATAATCCACACTCACACTCTCAATTACAATCACAACAACAACCACAACCTCTCTCTTTTGCAAATTCACTATCTCTTCCATCATCATCATCATCATCATCATCATCATGTTGCCGCGTCGCACGTATTTCTACCGAAGCATTAGAGCTATCTCACCCCTCTCCCAGCTTCAATTTCCGCCGCGAGATCGCCAGGCTCACCGCCCTCCGCGACAAGCTATCCCGATGCAATAATCTGAACGACAAGCTCAGAGTGATCGACGCGGACTATAGAGTTAAACGTTTCTTCCGTTCTTCCTCCCGAAATGCTGGATTAGCTAGGGTTTTATTGGACTCCAAAAGCTTGTTTTTGATTATGTGCTTGGTTGCTTCGGGTCAAGAGCATGTGTTGTGTTTGAGTGAAACTGTACCGGAATTGGACTCGCCGGCTATGGCTTCTGGTTCTGTTAAGAGTGCGTTTTATGCTCTGGCGAAGATGATCGAGAATATGGATTCCAGCAATTCTGGTGTTGGATTTGGGAAGTTGGATATGGGGATGAGTTTGGAGGATCATGAAATTCTGGATTTGAATAACTTGTTAGAGACTTTGGCACAAATTGAGAGCTTCTATGATTGCATCGGAGGAGTTATTGGTTATCAGATTACGGTTCTGGAACTTATAGCCCAACAATTGGTTGACCGGAAGAATACAAACTGGTCTCAGCACATGGGACTTGATTTAGTTGATTCTAACACTGGTGAATGTCTTCCTGCTGCAATGCTTCCGTTTTGTGGGAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATATGGCAAACAATGTATTACTCCTGTTGCAATAATGACAAGTTCGCAAAAGAACAACCACAAACACATCACATCCCTGTGCGAAAGACTCTCATGGTTTGGAAGAGGTCGATCAACTTTCCAACTTTTTGAGCAGCCTCTTGTTCCGGTTGTTGGTGCAGAAGATGGGCAGTGGTTAGTCACTAAACCATTCAGTCCCTTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTCATGACAAAGGCATCTTCAAATGGTTTTTTCATCAAGGAAGAAGAGGTGCAACTGTGCGCCAAGTCAGTAATGTTGTGGCTGCTACAGATGTAACCCTCCTGGCCTTAGCAGGGATCGGTTTGCGTCAAGGAAAGAAACTGGGGTTCGCATCTTGCGAGCGTATCTCAGGTGCAACAGAAGGAATTAATGTACTGATGGAAAAGAGAAGTCCAGATGGAAACTGGGAATATGGCGTTTCTTGCATTGAATACACTGAATTTGACAAGTTTGGGATTACTGACGGATCTCTTGTTCCAAAATGTTTGCAGGCAGAGTTTCCAGCCAATACAAACATCTTATATGTTGATTTACCATCTGCGGAGCTAGTTGGGTCAAGTAGGAATGTGAATAGTATACCAGGAATGGTGTTAAATACAAGAAAGACAATAGTTTATGTGGATCAGTTTGGAAGACACTGCAGTGTCTCTGGTGGCAGACTGGAATATAAGCTAGATACATTTATTGTATATAACGAAAGGAAAAGGGTTACCTCATCTGCTAAGAAAAAAAGAAGACATGGACACAAGTCTTTACGCCAGACACCTGATGGCGCTCTATTGGATATATTAAGAAACGCTCATGATCTTCTCTCACCATGTGATATAAAACTTCCTGAGATCGAAGCTGATGAGAACTACATTGATTCAGGACCACCATTTCTTATCCTTCTTCACCCTGCTCTTGGTCCTCTTTGGGAAGTCACCAGACAAAAGTTTTATGGTGGTTCCATATCAGTGGGCTCTGAGTTGCAAATAGAGGTTGCAGAGTTCTTTTGGAGTAATGTTCAGCTCAATGGAAGCCTGGTCATTATTGCTGAAAACGTTATGGGCTCAATGAAGATTGATGAGAACAGTGAATCCATACTACATCATGGACAAAGGTGTGGAAGATGTAAATTGCAGAATGTCAAGGTGTTGAACGAGGGAGTTGATTGGAGTTATGATGGAAATGTGTATTGGAAACATGATGTGAAACGGTCTGAGGTGCTGAAGATTGTACTGCATGGAAATGCTGAATTTGAAGCTACTGATGTTGTCTTACAGGGAAATCATGTCTTTGAAGTTCCGAATGGCTACAAACTTAAGATTATTCCCGGAAGCCAAGGTTTAGCAATCCAGTTGAATCCGATTGAACAAGGCATGATGGACAGTGGAAGCTGGCACTGGGATTACAATATAGAAGGTTCTCACATTAAACTAGAATTAGTAGAACAATAA 2409 0.4267 MLHSTSLLHHTHRFLFSFRSKPSLLDNPHSHSQLQSQQQPQPLSFANSLSLPSSSSSSSSSCCRVARISTEALELSHPSPSFNFRREIARLTALRDKLSRCNNLNDKLRVIDADYRVKRFFRSSSRNAGLARVLLDSKSLFLIMCLVASGQEHVLCLSETVPELDSPAMASGSVKSAFYALAKMIENMDSSNSGVGFGKLDMGMSLEDHEILDLNNLLETLAQIESFYDCIGGVIGYQITVLELIAQQLVDRKNTNWSQHMGLDLVDSNTGECLPAAMLPFCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSQKNNHKHITSLCERLSWFGRGRSTFQLFEQPLVPVVGAEDGQWLVTKPFSPLSKPGGHGVIWKLAHDKGIFKWFFHQGRRGATVRQVSNVVAATDVTLLALAGIGLRQGKKLGFASCERISGATEGINVLMEKRSPDGNWEYGVSCIEYTEFDKFGITDGSLVPKCLQAEFPANTNILYVDLPSAELVGSSRNVNSIPGMVLNTRKTIVYVDQFGRHCSVSGGRLEYKLDTFIVYNERKRVTSSAKKKRRHGHKSLRQTPDGALLDILRNAHDLLSPCDIKLPEIEADENYIDSGPPFLILLHPALGPLWEVTRQKFYGGSISVGSELQIEVAEFFWSNVQLNGSLVIIAENVMGSMKIDENSESILHHGQRCGRCKLQNVKVLNEGVDWSYDGNVYWKHDVKRSEVLKIVLHGNAEFEATDVVLQGNHVFEVPNGYKLKIIPGSQGLAIQLNPIEQGMMDSGSWHWDYNIEGSHIKLELVEQ 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01711 802 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 258 579 IPR029044 -
Vifa2g01711 802 SUPERFAMILY Nucleotide-diphospho-sugar transferases 141 672 IPR029044 -
Vifa2g01711 802 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 77 248 IPR039741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01711 Vifa-Chr2 443130129 443137079 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01711 K22920 - gmx:100788781 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01711 2 443130129 443137079 Vifa2g01711 2 443130129 443137079 ECH