Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01676 ATGGCGTCTTTATGGCGCGTTGGAACCAAGCTAACTCTACTAGCATCCGTCCTCGGCGGCGGTGGCGCAGCGGCTCTTATTGCCACCTCCGACGATCCTGCAACGGCGCTCAATCTCTCCATAACCATTCCTCGTCGTCTCTTTGCCGACGCCGTCGCTGCCGCCAACATTGTGTTCGATTATGAGTATTCACTGTGGGGAATCCCGGAAGGGAGTACTGAGAGGGAGAAAATGAAGCATGAAGTTCATCTTCGTTCAGCAGAAAAACTTCGAGACCTGTGTTTTAAGAATGGAGGGATTTATATAAAGCTCGGGCAACATATCGGGCAATTGGAATACTTAGTTCCTAAAGAATATGTTCAGACCATGAGGGAGTCCATGCTAAATAGATGTCCGGTTTCTTCGTATGAACAAATATGTAATGTATTCAAGAAAGAGTTTGGAGAGACACCGGATAAAGTATTTGCCGAGTTCGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCACAAGTTCACGTAGCCCGCACACACGATGGCCAGAAAGTTGCTGTGAAGGTCCAACATTCTCACATGACTGAAACTGCGGCTGCTGATCAAGCCACTGTAGAATTGATTGTGAATACTCTGCATAATTTTTTCCCTAGTTTTGATTACAGGTGGTTGATTGATGAGATTAAAGAGAGTTTACCTCAGGAATTGGACTTTTTAACGGAGGCAAAGAACAGTGAGAGGTGTTTGGAGAACTTCCGTAAGTTGTCTCCTCATATTGCAAATTATGTATATGCACCAAAAGTATATTGGAATCTGAGTTCGTCAAAGCTGCTTACAATGGAATACATCGATGGTGCTTATGTAAATGATGTGAAGACCATTAAGAAACTAGGGATCCGACCACATGAACTTTCAATATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCATGGGTTTGTACACTGTGATCCACATGCTGCAAATTTGTTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATCCTGGGCTGGAGAAAACCACAGTTGATTCTTTTAGACCACGGACTCTATAAAGAGCTTGACTTCAATACAAGAACTAATTATGCTGCACTATGGAAGGCGTTGATATTTGCTGATGCTGATGCAATCAAGGAATACAGTACAAAGTTGGGTGCTGGGGAGGATTTATATGCACTTTTTGCTGGAGTTCTAACAATGAGACCTTGGAATAGAGTTGTTGACCCATCGATGGATCACTTAGTTATACAGGGAAGTCAGAGTGAACTATCAGAACTTCAGATGTATGCTTCTGAATATTTCCATGAAATCTCAGAGCTTCTAAGGAGATTACCACGTGTGATTCTTCTAATGATGAAGACAAATGACTGTTTACGGGCAGTCAACAATACCCTGATACATGGATCACATCTGGAAACATCTCTGAAGACATCTTGTATCATTGGAAGGGTTTCTTCCGAGGCTGTCACTGCGGCAAAAATGTCACAAAGCAAGTCAGTTCTAACTTGGTTTAGCATTAAATTGGATAATATTTTGCTGGAAATACAGATTTGGAAAATAAAGATGGCCCTGTGGCTTTTGCAACTGAGAAAGGCGTTGCCTTGGTCTCACAGAGCATCATAA 1638 0.4274 MASLWRVGTKLTLLASVLGGGGAAALIATSDDPATALNLSITIPRRLFADAVAAANIVFDYEYSLWGIPEGSTEREKMKHEVHLRSAEKLRDLCFKNGGIYIKLGQHIGQLEYLVPKEYVQTMRESMLNRCPVSSYEQICNVFKKEFGETPDKVFAEFDPVPIASASLAQVHVARTHDGQKVAVKVQHSHMTETAAADQATVELIVNTLHNFFPSFDYRWLIDEIKESLPQELDFLTEAKNSERCLENFRKLSPHIANYVYAPKVYWNLSSSKLLTMEYIDGAYVNDVKTIKKLGIRPHELSILVSQTFAEMMFKHGFVHCDPHAANLLVRPLPSSKASILGWRKPQLILLDHGLYKELDFNTRTNYAALWKALIFADADAIKEYSTKLGAGEDLYALFAGVLTMRPWNRVVDPSMDHLVIQGSQSELSELQMYASEYFHEISELLRRLPRVILLMMKTNDCLRAVNNTLIHGSHLETSLKTSCIIGRVSSEAVTAAKMSQSKSVLTWFSIKLDNILLEIQIWKIKMALWLLQLRKALPWSHRAS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01676 545 CDD ADCK1-like 126 390 IPR045307 -
Vifa2g01676 545 PANTHER ABC1 FAMILY PROTEIN 35 480 - -
Vifa2g01676 545 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Vifa2g01676 545 SUPERFAMILY Protein kinase-like (PK-like) 129 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01676 Vifa-Chr2 437818730 437831423 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01676 K08869 - gmx:100796182 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01676 2 437818730 437831423 Vifa2g01676 2 437818730 437831423 ECH