Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01626 ATGATCGGAGTCGGAAAGATAAAGCAGTACGGTAACGTCCTCGATAAGCCCCTCAACAAGGGCAAGACAGAGGTTAGTTTGAGTGCATTTGCGTTCTTGTTCTCCGAGCTTGTTCAGTACAACCAAACTCAGGTTGACAATATCGGCGAACTCGAACGAAGACTGGAGGATGCTGGATATGCTGTCGGGGCTCGTGTTCTTGAGCTGCTCTGCCACAGAGATAAGGTATTAGGTTCATATAAGAAGAACAAATATGCATACTTCATTGACTCAAGTAGGTCATTATATCTTAATGCATTAGGTACCAACAATCCAGCTAACTTTCTTCAGCAAGAAAGCACAATCTTCACTCTTAAACCAATACCAGGAAACAGGAGGGAGACACGGTTGTTGGGTATTCTTTCTTTTGTACACAGTACAGTGTGGAAAGTACTATTTGGAAAGGTAGCTGACTCATTGGAGAAAGGAACTGAACATGAAGATGAATACATGATCAGTGAAAAGGAACTCCTAATTCATTTCTATCCCAAAGGACATGGGAACACATTTAACTGCGGTGCATTCGTTGCCGGAATAGTCCGGGGTGTTTTGGACGGTGCCGGGTTTCCGGCTGTCGTAACAGCTCATTTTGTGCCCATGGAAGGCCAACAACGACCCCGGACAACCATTTTGATAAAATTTGCTGAAGAGGTGTTACGCAGAGAAGCAAGATTAGGCTGA 720 0.4431 MIGVGKIKQYGNVLDKPLNKGKTEVSLSAFAFLFSELVQYNQTQVDNIGELERRLEDAGYAVGARVLELLCHRDKVLGSYKKNKYAYFIDSSRSLYLNALGTNNPANFLQQESTIFTLKPIPGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLIHFYPKGHGNTFNCGAFVAGIVRGVLDGAGFPAVVTAHFVPMEGQQRPRTTILIKFAEEVLRREARLG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01626 239 Gene3D Trafficking protein particle complex subunit 3 23 239 - -
Vifa2g01626 239 PANTHER 41-2 PROTEIN ANTIGEN-RELATED 4 238 IPR016696 GO:0030008|GO:0048193
Vifa2g01626 239 PIRSF TRAPP_1_Trs31 5 239 IPR016696 GO:0030008|GO:0048193
Vifa2g01626 239 SUPERFAMILY Ligand-binding domain in the NO signalling and Golgi transport 23 237 IPR024096 -
Vifa2g01626 239 CDD TRAPPC5_Trs31 25 227 IPR016696 GO:0030008|GO:0048193
Vifa2g01626 239 Pfam Transport protein particle (TRAPP) component 30 227 IPR007194 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01626 K20280 - mnt:21388907 328.561