Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g01624 ATGGTTCCATTCTCCATCTTCGTCTTCTTTTCCTCAATCCTCTTTCTTCAACCATTTTCTTGTTCTTCTTCTCTTTCTTTCTCCAACAACCCCAATTTTGACTCCGACATTGACCTCTTTGGCGATGCAAAGCTTCTCGCCGATCACTCCGGTGGTTCCCACGTCAAACTCACCCACCATTCTTCTCTCACCGCCGGTCTCCTCCTCCGCCATAGCCCCGTCACGTTCACCAACCCCACTTCCTTCTTCATCGAATTCTCATTCTCCATTACCCCCGGCCCCGGCGATGGTCTCATTCTTCTCATCATCCCCGGTGATCTCTCGTCTGCATTCCCCGGTAATGGCTCGTACGGTCTTTCCCCTCCGACTAACAGCTACGTCGGCGTTGAATTCGATACGTCGAAAGACGTTGATGTTGGTGATGTGAACGCGAATCATGTCGGGATTGATGTCGGAAGCCTCATCTCTGTGGCGGTTGCGAATGTTTCTGAGTCGAATTTGGTTCTCAATAACGGCGAGAAGTTGAAAGCTTGGGTTGATTATGAAGCTGGCTCGCAAAAATTGGAAGTTAGGTTAAACAAATTGAATGAATCAAAATCTTTGAACCCGATCGTTTCGCATAACATTGATTTGTTTAAGATTTGGGGTAACGAGCCTGTTTTCATGGGTTTGAGTTCTTCGAATGATGCTAATTCTGTTCAGGTTGTTCGTGTTTATTCATGGAAGGTTAGTTTGAAGAATGTTTCGAATTCGTTACATTCTGAACCCGTTAACCCTAAAGAACAAGAACAAGGACAAGCGAAGGTTGATGCGAAAAGAAAGTACCGTCCTTTGACGTTTCTGGCTGGTTTGATATTTGGATCTGTTTGTGTTGTGTTGGTGACATTTGTGGTATTGTTTATGTGGGTGATTTTCTTCCATAAACGTGAAGAAGAGTCTCTTGCTAAATTGCCTGAACACCCTTCTGATGTAAGGTATGAAAGGATTGATGTTGCTGTGGACAAGAATGCTGAAGATCACGAGGAACAACATTAG 1035 0.4473 MVPFSIFVFFSSILFLQPFSCSSSLSFSNNPNFDSDIDLFGDAKLLADHSGGSHVKLTHHSSLTAGLLLRHSPVTFTNPTSFFIEFSFSITPGPGDGLILLIIPGDLSSAFPGNGSYGLSPPTNSYVGVEFDTSKDVDVGDVNANHVGIDVGSLISVAVANVSESNLVLNNGEKLKAWVDYEAGSQKLEVRLNKLNESKSLNPIVSHNIDLFKIWGNEPVFMGLSSSNDANSVQVVRVYSWKVSLKNVSNSLHSEPVNPKEQEQGQAKVDAKRKYRPLTFLAGLIFGSVCVVLVTFVVLFMWVIFFHKREEESLAKLPEHPSDVRYERIDVAVDKNAEDHEEQH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g01624 344 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 19 321 - -
Vifa2g01624 344 CDD lectin_legume_LecRK_Arcelin_ConA 29 241 IPR001220 GO:0030246
Vifa2g01624 344 Pfam Legume lectin domain 26 255 IPR001220 GO:0030246
Vifa2g01624 344 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 245 IPR013320 -
Vifa2g01624 344 Gene3D - 23 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g01624 Vifa-Chr2 432183438 432184472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g01624 12 227 Receptor kinase-like Gene Family AT2G29250 33.195 1.65e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g01624 - - tpra:123898370 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01624 2 432183438 432184472 Vifa2g01624 2 432183438 432184472 ECH